FMO12109.5prime Sequence
435 bp (370 high quality bases) assembled on 2012-07-23
> FMO12109.5prime
CAGTCGACATGTGGTTGGCTGGGAATCTGTTCAAAGGATCCGTAGCAATC
AGATTCGGTCGCTTGCTGCATCTCAAGCGCAAGGAGGTTTATATGGAATG
CTTCCGCATCCTGGGCGTTCACGAATCAGCTGATCAGAATACGGTACGCC
ACGCCTACTTGGATCTGGTGAAACGGGTGCATCCCGATTCGGGAACGGAG
GAGGCCAGTGCCGAACGCTTCCAGCAGGTGGACGAGGCTTTCCGTGTGCT
GCAGGAAAAGTTCGCCAAGGGAAGGCGAAACATTCAGGAGGACGAGGAGG
GGGCCATGGAGTTTGACATCAAGCATACGGCGCCGCAGCACCGGCAATAT
CTGTCCAACGAGGGCATCGGAGTGGGAACTTCATTTCAGCCGCAAAACAG
TCCAAGCAGGTGGGCGCCTGAAGGCTAAGAACGCT
FMO12109.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:55:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43322-RA | 1272 | CG43322-RA | 101..529 | 9..434 | 1980 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:55:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7013652..7013976 | 95..418 | 1500 | 98.2 | Plus |
| 2L | 23513712 | 2L | 7013496..7013583 | 9..96 | 440 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 17:55:45 has no hits.
FMO12109.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-23 10:31:46 Download gff for
FMO12109.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13776-RA | 93..529 | 1..434 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:37:03 Download gff for
FMO12109.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43322-RA | 93..529 | 1..434 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:43:58 Download gff for
FMO12109.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG43322-RA | 93..529 | 1..434 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:43:58 Download gff for
FMO12109.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7013488..7013582 | 1..95 | 95 | -> | Plus |
| 2L | 7013653..7013994 | 96..434 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:37:03 Download gff for
FMO12109.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7013488..7013582 | 1..95 | 95 | -> | Plus |
| arm_2L | 7013653..7013994 | 96..434 | 97 | | Plus |
