FMO12110.5prime Sequence
1107 bp (1031 high quality bases) assembled on 2012-07-23
> FMO12110.5prime
CAGTCGACATGCTGCGACCACTGTGCATTATTCAGATCCTTTTGCTCGCT
TTCCTGGCGAACGAGTCGGAATCCTCGAACACTCATCTCCATCGCTATAT
GCTGGACACCTATAAGCCGCAGCACAATCGAAAAACCCAAATGAACTACA
AACGACGCCGTACTGTAAGGAGCGATCACGAAATGGCTATCGATCCCAAT
AATCCAAATAATCCCAATAATCCAAATAATTCCGATAGTCCCGATAATCC
CAATAATCTCAATAATCCAAATAATCCGAATAATGACACAGTACAGTATG
GACATTCCAAGGAGCCTGTAGTTACCTTGACCAATTCGGACAAGAAGGTG
CCGCTGCACGAGCTGATGGTGAGACTCTATCAGCAAAACAAATATATCTG
CATGGGCACGGTGATATCCGAGATGCTAGTGATTACCACTAGCACTTGTT
TTAATTTGGCCAGCAGTGAAGTGGTCACGATGAAGATGTACGATGACGAA
GTCCTCGAAGGGAAAAGAGTCGCTCTCAACCAGACCTACCTTAAAGGAGC
GGATCCCATGCTGGTTGCTATTCAACTAACCAAGTCCCCAAAGAATTCCA
AAGTGACTGGTGACACCGTGAAGCTGTGCGATTCGGAGCTAGAAATATAC
GAGCCCATCGAGCTGCCACTGTGGATCAGGAGTCGCCACAGTATTCACTC
GCAGACAACGTACATCATACCGATGCAGGCGTGCCGACTCCGCATGAGGG
ATCCCGAAGCGATGGTCGCCACCGACACTATGATCTGCGTGAAGAACATG
AAGTATACGGCCCAGTGCCAGTTGGCCATGGGTAATCCCCTCGTTCACGA
CGAACGCATCTGCGGCATCAATGTGGCTGGTCACAACTGTCCCGCCTACA
CGGGCGTAGATCTATACATCAGGTATACGATGCTCTCGCCTCCTCGATAA
TGGGCATGAAATCATTAAAACTCCCGGCATAGAGATACCATTTGCAAGCT
TTCTAGAACATTCGTTTGGCGGCGCGGGCCAGTAGTGTCATAATCTAATT
CATATCTAATCCATATTCCAACTTAGCTAGGAATTCTGTCTGAACTAGGC
CTGAATT
FMO12110.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:55:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9997-RB | 1325 | CG9997-RB | 1..988 | 9..993 | 4790 | 99.3 | Plus |
| CG9997-RA | 1030 | CG9997-RA | 1..988 | 9..993 | 4790 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:55:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 28755992..28756979 | 993..9 | 4700 | 99.1 | Minus |
Blast to na_te.dros performed on 2014-11-28 17:55:23 has no hits.
FMO12110.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-23 10:31:40 Download gff for
FMO12110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9997-RA | 1..993 | 9..997 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:36:49 Download gff for
FMO12110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9997-RA | 1..993 | 9..997 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:43:44 Download gff for
FMO12110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9997-RA | 1..993 | 9..997 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:43:44 Download gff for
FMO12110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 28755987..28756986 | 1..997 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:36:49 Download gff for
FMO12110.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 24581709..24582708 | 1..997 | 98 | | Minus |
