FMO12122.5prime Sequence
803 bp (801 high quality bases) assembled on 2012-07-23
> FMO12122.5prime
CAGTCGACATGAGCAGTTCGATATTTCGGGCCTTTTGGCTACTTTGTTCA
CTGCTGATCTGTGTCACGAATGCCGCTGATTATCGACTGGAAGGTAGCGT
CGTACCATCGCACTACAACCTGACCATCGGTGTTTTGCGGAACTCAGTCG
AGCCCACTATTTTCGATGGCGAAGTGAGCATTACCTTGCGGGTGGTCGGA
ACTTTGGAGGTGCAACAAATCATTCTACACGCTGATACGCTCGACATTAC
GGAATGTTGGCTTTTGGATGCGGCAGGTGCGCAGGTGGAGGCCATCGATA
TCAGCAGGTTGATTTATGAGGCCGCCACCCAACAGGTGAGAGTTCCGCTG
ACGGAGGCCGCGCAGCCAGGCAAAAATTATACGCTCGGGTTCAAGTACAC
CGGGCACATACGAACGGATATGGCCGGCTTCTTCTCCGCCAGCTATGTGG
AGAGGGATACCAATGTGACCAGGTGGTTGGCTCTCACCCAGATGCAGCGC
ATCAACGCCCGTTTGGTCCTGCCCTGCTTCGATGAGCCCGCCCTGAAGGC
ACAGTTCCAACTGCAGATTGTTCGGCCCAACGGGTATCAGTCGATTGCCA
ACACCAAGCTAAAAGAAACTAAAGCTTTAAGCCAAGATCGTTTTGTCGAT
CACTTCAAGGAGACCCCTGTAATGTCCACATATCTGCTGGCCTTCATGGT
GGCCAATTATTCTGCACGTGGAAATGAGAGTGAGTTCGCAGTGCTCACTC
GTCGGAGTTTTATGATAAAACAGAGTCCAGCTACCATGTGGGTCAGCAGG
TGT
FMO12122.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:55:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42335-RE | 2786 | CG42335-RE | 5..805 | 3..802 | 3935 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:55:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21758768..21759396 | 3..631 | 3130 | 99.8 | Plus |
| 3R | 32079331 | 3R | 21759458..21759635 | 626..802 | 795 | 97.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 17:55:49 has no hits.
FMO12122.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-23 10:31:46 Download gff for
FMO12122.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42335-RD | 1..795 | 9..803 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:37:06 Download gff for
FMO12122.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42335-RC | 3..805 | 1..803 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:44:00 Download gff for
FMO12122.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42335-RE | 3..805 | 1..803 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:44:00 Download gff for
FMO12122.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21759464..21759635 | 632..803 | 97 | | Plus |
| 3R | 21758766..21759396 | 1..631 | 99 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:37:06 Download gff for
FMO12122.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17584488..17585118 | 1..631 | 99 | -> | Plus |
| arm_3R | 17585186..17585357 | 632..803 | 97 | | Plus |
