FMO12127.5prime Sequence
608 bp (608 high quality bases) assembled on 2012-07-23
> FMO12127.5prime
CAGTCGACATGGACTATACACGTGAAATTTTGACCTTCCAGTTCGGAACG
TACGCGAATTACGTGGGCACACACTTCTGGAACCAGCAGGAGGCCAACTT
TAGGTACGGAGACGAAAGCGAACAGGTGGCCGAGGAGCAGCTGCCCAACA
ATGATATTTTGTACCGTGAAGGGCGCAACGACCTCAATCGTACCACCTAC
ACGCCCCGCCTGCTGTCCGTGGATTTGTCCGGGACCCTGGGACATCTGCC
GGTGACCGGCGAGCTGTACGGCAATTTTGTGCAGCGTGATGAGGAGTTGC
TGCCCCTGAGCACCGGAGAGGAATTGGAACAGGTTCGCAAGCGGGCAGAG
GAGAGCGGCGTATGCTCACCGGAGCAGCTGGAAGTGCAGGAGCAGTCGAA
GGCCTCCATTTCCGAATATCAGCGGGATCTGCTCAAGAATGCTGTGTTGC
CCGAGAAGAACTATCAGCTGGCAGCGACGGCAAACAGTTGGGTGGACTTC
CTTTACGCCAGGTATCACCCGAGAACCTTGAATGTCTTGCCGGAGCTGAT
CCCGAGATCCGACTGCCCAAGCCCTGGGTACCTACTCTGCCGGAACAGAT
ATGTGGCA
FMO12127.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:56:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mst-RB | 2443 | CG1424-RB | 36..634 | 9..608 | 2930 | 99.3 | Plus |
| mst-RA | 1893 | CG1424-RA | 36..634 | 9..608 | 2930 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:56:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 21389145..21389665 | 87..608 | 2515 | 99.2 | Plus |
| X | 23542271 | X | 21389012..21389093 | 9..90 | 410 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 17:56:37 has no hits.
FMO12127.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-23 10:31:56 Download gff for
FMO12127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mst-RA | 1..603 | 5..607 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:37:36 Download gff for
FMO12127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mst-RA | 36..633 | 9..607 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:44:27 Download gff for
FMO12127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mst-RA | 36..633 | 9..607 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:44:27 Download gff for
FMO12127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 21389012..21389092 | 9..89 | 100 | -> | Plus |
| X | 21389148..21389664 | 90..607 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:37:36 Download gff for
FMO12127.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 21260039..21260119 | 9..89 | 100 | -> | Plus |
| arm_X | 21260175..21260691 | 90..607 | 99 | | Plus |
