FMO12132.5prime Sequence
1129 bp (1023 high quality bases) assembled on 2012-07-23
> FMO12132.5prime
CAGTCGACATGCTTAGCTGTAGGCAACTTATTTCTCGGCTGAGCCTTCTT
CGGCAGGCGAGCACATTTGCTTGTGTGCGACTATGCCCCGACTATGTAGA
AGTCCAGGAGGAGCAGGGCAATCTCCTGAAGTACCCCCAAGTTTGGCTTA
GGGACAACTGTCAGTGTGCCGAGTGCTTCCACGCCGCCACAAGAGCAAGA
AAAAGTCACTGGGATCGTGGCCCGCTGAATATACCAGTGTCCCAAGTGGC
CTACAACAAGGAGAGGAAACAGTTGGAGATCATCTGGCAGGACAAGCACA
GGAGCACCTTCGATCTAGGCTGGCTGAGGGAAAGGGACTTTGGAGAGACT
GGCAGAAAGCATTACTTGGAGGAGGTCTACAAGCCACCCGCTCAACTCTG
GGGAAAAACGGAGTTCGAGGATGTGAAAAGAGAATTCCAATACGAGGATG
TGCTGGAGCAAGATGCAGCCCTGAGAGTTTGGCTTGAGGCACTGGCAGTC
CAAGGATTCGCCATTCTGAAAGGGGCACCCAACGACATAAATGTGGCTAA
GAAATTGGCCGAACGAATTGGCTACATAAAACGCACCACCTACGGCGACG
TTTTCGAGGTTAAATCCAAACCAAATGCGCGCAACTACGCCTATCTAATG
ACTCCCCTGCCGCTTCATACCGACATGCCCTACTACGAGTACAAGGCGGG
CATCAACATCCTGCACACCCTCGTCCAGTCGGAGTCAAAGGGTGGAGCAA
ATACGCTGACAGATGGCTTCAACGTGGCCTCGCAGTTGCAAAAACTGCAT
CCGGAGGACTTCGAGGTGCTCAAGTCGGTGCCCGTTAACTGGTTTGACAT
CGGACACGACGGCGATGACTCCAAGCCCTTCCACAGTCTCTGGAGAGCGC
CAGTAATTTGTTTGGATGTGATGGCCGGTCGCGAGGATCAACCAGAACAC
CACTAAGCGGACAGCCGGTTCTCCGTTCCCTGGCGCAGCCGTGTCCTGTA
CAAAGCCTACGAATAAGTTCCTTGAAGAATCGCCCAGTCCGAGGGCGGTG
GAGTTCAGGATCCAGCGGCGATGTGTTCGTCTTCCACAACCTGGCCTATG
TTGACACGGAGACGCCTTACAAGGAGTGC
FMO12132.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:56:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14630-RA | 1358 | CG14630-RA | 29..1149 | 9..1125 | 5130 | 98 | Plus |
| CG33082-RB | 2303 | CG33082-RB | 708..1294 | 9..595 | 2935 | 100 | Plus |
| CG33082-RB | 2303 | CG33082-RB | 1606..2140 | 595..1125 | 2200 | 95.7 | Plus |
| CG33082-RA | 796 | CG33082-RA | 708..796 | 9..97 | 445 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:56:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 1031524..1032110 | 9..595 | 2935 | 100 | Plus |
| X | 23542271 | X | 1032422..1032924 | 595..1093 | 1930 | 96.6 | Plus |
Blast to na_te.dros performed on 2014-11-28 17:56:47 has no hits.
FMO12132.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-23 10:31:58 Download gff for
FMO12132.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14630-RA | 14..1123 | 1..1110 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:37:42 Download gff for
FMO12132.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14630-RA | 14..1123 | 1..1110 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:44:31 Download gff for
FMO12132.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14630-RA | 23..1132 | 1..1110 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:44:31 Download gff for
FMO12132.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 1031518..1032110 | 1..595 | 99 | -> | Plus |
| X | 1032423..1032939 | 596..1110 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:37:42 Download gff for
FMO12132.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 925551..926143 | 1..595 | 99 | -> | Plus |
| arm_X | 926456..926972 | 596..1110 | 96 | | Plus |
