FMO12133.5prime Sequence
959 bp (959 high quality bases) assembled on 2012-07-23
> FMO12133.5prime
CAGTCGACATGCTGAACATCGTGTGTAGAGTCTGCGGAAGGCAGAAAATC
TGTGAGAAGAGCCTGAATCTCTTCGATTTGGTCAACCGAAAATATCTAAA
GCACTTGCACATGATAAGCGGACTAAGATTGGTGGATTTGGACGATGTTC
CTGGTTTCATGTGCCTTTGCTGTCAGGCGGAACTCAGATCGGCATTGGCA
TTCCGGAAGCTTTGCATTAAGACCCAAACTAAATGGCTAACCATCGAGGA
CGACTCTTCGTCGGGTGATGAAGATACCAATGACAATTCGGAACTGGAAT
CGGAAAAATGCGCATTCAGCGATTTTGGGAAAAAGAAAGAAGGCGAGTTG
GTTGAAGAAACTTTTCAGGTACTGATTGAAGAGGAGCCCATGGACAAAAC
TCTGAATAGAGATGCGAAAGCGCAGCTGAGGGAAGATGGAATAGATGTTA
AGTGTGTACCTTCACAAAAGATTATCAAAGTATCAACCAAACTGGATGAT
CAGATTTACATATGCGAGCTGTGCGGGACTCATGCCACATCGAAACCCAC
TTTCCAGCGCCACATGAGAAAACACAGAGGCGAACGACCATTTGGCTGCA
AGGATTGTGATGCCAGGTTTCTCTCTGCTGGCGAACTACGTGCCCACCAC
CGGGTACATACTGGGGAGCAACCGTTTGCCTGTCGCTTCTGCGAAAAGCG
GTATGTCAGCTACATGGGCCGGCTGATCCACGAGCGGACTCACACCAACG
ATCGACCCTATGTGTGCGAAGAGTGTGGCAAGAAGTTCACCACTGCCTAC
GTCCTAAAGAACCACATGGTCATCCACACGGGCGAGAGGAATTTCCGATG
CGATATTTGCGATCGCTCCTTCCAGAGAAAGGCGCACCTGGTAACGCACA
CCAGATCCATGATGCACCTCCCAATGTCAGAAGCAGAAGTCACAAGCTTT
CTAGACCAT
FMO12133.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:56:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11762-RA | 1141 | CG11762-RA | 1..941 | 4..942 | 4595 | 99.4 | Plus |
CG8159-RB | 1328 | CG8159-RB | 870..977 | 729..836 | 245 | 82.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:56:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 8725652..8726125 | 129..602 | 2340 | 99.6 | Plus |
3R | 32079331 | 3R | 8726188..8726507 | 602..921 | 1600 | 100 | Plus |
3R | 32079331 | 3R | 8725479..8725603 | 4..128 | 610 | 99.2 | Plus |
3R | 32079331 | 3R | 8727853..8727960 | 729..836 | 240 | 81.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 17:56:50 has no hits.
FMO12133.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-23 10:31:59 Download gff for
FMO12133.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11762-RA | 1..950 | 4..950 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:37:43 Download gff for
FMO12133.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11762-RA | 1..950 | 4..950 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:44:34 Download gff for
FMO12133.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11762-RA | 1..950 | 4..950 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:44:34 Download gff for
FMO12133.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 8725477..8725603 | 1..128 | 97 | -> | Plus |
3R | 8725652..8726124 | 129..601 | 99 | -> | Plus |
3R | 8726188..8726539 | 602..950 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:37:43 Download gff for
FMO12133.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 4551199..4551325 | 1..128 | 97 | -> | Plus |
arm_3R | 4551374..4551846 | 129..601 | 99 | -> | Plus |
arm_3R | 4551910..4552261 | 602..950 | 98 | | Plus |