FMO12134.5prime Sequence
389 bp (389 high quality bases) assembled on 2012-07-23
> FMO12134.5prime
CAGTCGACATGGCCAGCCTCAAGTGGTTAGCTATTCTACAACTCTTAATT
ATTTTCGGTGCTCTTGGGCACGCCGAAGTTGATGAAATTACCGATGTCGT
AAAGGAGAAGCTTTATGAGGCTATCTCCAAAACTGGATCTACGATCAAAT
CCGGATCGGCAAGCTTACAGAGTCTTGATGATGCCGTGCGTAACGTTATA
AAAATGAAAAAGGGCGCGGCTAAGTCGCTCTTGGATCTAGTAAGCAATCG
TATCTTAAAACCTGAAAAGGACGCACCCGCTTCCCTCTCATCATGTGGTG
AAGGGGAATTAGTTTGTGAAATCAAAGGGGTACTGGCCGCAGAATCCACA
CAGCAACCAAACACCATAACTGCAAGCTTTCTAGACCAT
FMO12134.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:56:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Sfp26Ad-RB | 612 | CG42603-RB | 51..413 | 9..371 | 1815 | 100 | Plus |
| Sfp26Ad-RA | 435 | CG42603-RA | 31..393 | 9..371 | 1815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:56:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5942822..5943133 | 371..60 | 1560 | 100 | Minus |
| 2L | 23513712 | 2L | 5943203..5943254 | 60..9 | 260 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 17:56:20 has no hits.
FMO12134.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-23 10:31:53 Download gff for
FMO12134.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp26Ad-RA | 10..375 | 9..375 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:37:25 Download gff for
FMO12134.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp26Ad-RA | 10..375 | 9..375 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:44:16 Download gff for
FMO12134.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Sfp26Ad-RA | 31..396 | 9..375 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:44:16 Download gff for
FMO12134.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5942819..5943132 | 61..375 | 99 | <- | Minus |
| 2L | 5943203..5943254 | 9..60 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:37:25 Download gff for
FMO12134.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5942819..5943132 | 61..375 | 99 | <- | Minus |
| arm_2L | 5943203..5943254 | 9..60 | 100 | | Minus |
