FMO12135.5prime Sequence
443 bp (443 high quality bases) assembled on 2012-07-23
> FMO12135.5prime
CAGTCGACATGATTCGAAAGTATTTAGTTCTTATCTTAGTCCTGGGTTTC
CTTCATCTCACCTGGAGTTCATCGGGGTCGTGCAAGGATGGTTTGGTTTT
TAACCCCAAAAAGCGGGTATGTGAACCGAAGCCAACGACAGAACCTCCAG
ATACTTGCCGACCCGGAACGTACTGGATTCTAGAGAAGAAATCGTGTATC
AAGTTGCGGCAAGTAATGTCTGGATATTTTCCTGCAAAACCTGAAAAGCC
CATCCAAGACCTGAAGTGCCCCAAAGGATTAATTTCTTTGGGAAATTTGT
GTGTAAGGGAGTTAAAAATTAAAAAAAAATCTCAAGGGAGCGGTAAAAAC
GGAATAGAGGTGGATATGGACGATAAATATAAAATTGTCATAAAAGAAAA
ACAGACTGACCCTCCTCTTGATGCAGCAAGCTTTCTAGACCAT
FMO12135.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:56:25
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sfp51E-RA | 538 | CG42476-RA | 8..424 | 9..425 | 2085 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:56:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 15192742..15193004 | 425..163 | 1315 | 100 | Minus |
2R | 25286936 | 2R | 15193068..15193221 | 162..9 | 770 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 17:56:24 has no hits.
FMO12135.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-23 10:31:54 Download gff for
FMO12135.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp51E-RA | 1..432 | 2..435 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:37:28 Download gff for
FMO12135.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp51E-RA | 1..432 | 2..435 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:44:18 Download gff for
FMO12135.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sfp51E-RA | 1..432 | 2..435 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:44:18 Download gff for
FMO12135.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 15192734..15193004 | 163..435 | 98 | <- | Minus |
2R | 15193068..15193221 | 9..162 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:37:28 Download gff for
FMO12135.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 11080239..11080509 | 163..435 | 98 | <- | Minus |
arm_2R | 11080573..11080726 | 9..162 | 100 | | Minus |