FMO12136.5prime Sequence
391 bp (391 high quality bases) assembled on 2012-07-23
> FMO12136.5prime
CAGTCGACATGGTTGCCAAGATTCTGCTGAGCCTGCTGCTCCTCGCTGTT
GTCACCGATCTGGTCTCAGCCCAGTGCTCCCAAAACCTGTGCCCAGTGGT
CACGAACTCGAATCCCCGGTGCAAGGGAAAACTTCAGTATCAATGCGTTT
GCGACTACACCTGCTCCGAGTGGGACAAGCCCTGCAACTGGGTACTTACA
TGTCCTGAAGAAATCGACGACATCAATGAAGTGCGCGACAAGAGAAATAA
GCTAAATTTGTTCAGATTGCCCAATCGAAACCGCCTGGAGTGCCTGGACA
TCAATGTCTACACCATTACGCGTCCGAATTGCTGCGACTTGTTCTGCAAG
TCTAAGCTTAAAATGTCTGTTTCGCAAGCTTTCTAGACCAT
FMO12136.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:56:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG15404-RB | 468 | CG15404-RB | 16..386 | 4..373 | 1815 | 99.5 | Plus |
| CG15404-RA | 406 | CG15404-RA | 16..386 | 4..373 | 1815 | 99.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:56:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 3173987..3174238 | 4..255 | 1245 | 99.6 | Plus |
| 2L | 23513712 | 2L | 3174304..3174422 | 256..373 | 545 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 17:56:27 has no hits.
FMO12136.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-23 10:31:54 Download gff for
FMO12136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15404-RA | 1..372 | 6..377 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:37:30 Download gff for
FMO12136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15404-RA | 1..372 | 6..377 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:44:20 Download gff for
FMO12136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15404-RA | 14..389 | 1..377 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:44:20 Download gff for
FMO12136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 3174304..3174425 | 256..377 | 97 | | Plus |
| 2L | 3173985..3174238 | 1..255 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:37:30 Download gff for
FMO12136.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 3174304..3174425 | 256..377 | 97 | | Plus |
| arm_2L | 3173985..3174238 | 1..255 | 98 | -> | Plus |
