FMO12138.5prime Sequence
949 bp (949 high quality bases) assembled on 2012-07-23
> FMO12138.5prime
CAGTCGACATGTTAAGGCGCAGTCTAAGCCATCTGGACAAGCTGCCGAAG
GCAAAGGTGGCCGAATGGCTGGCCGGGATCGACACCATTATTTGCAGCAC
GGATGGGGTGCTGTGGCAGGAGAATACCCCCATTGAGGGCTCTGTAGAGG
CATTCAATGCCATAATTTCAAAGGGAAAGCGATGTCTCATAGCCACCAAC
GAGTGCTGCCTAACAAACAAGGATCTGTTCCAGAAGGCCAAGTGCCTGGG
CTTCAATGTCAAGGAGCAGGACATTTTCAGCTCGTCGGGTGCCATTGCGA
GTTACCTTAGCGACCGGAAGTTTAAGAAGAAAATCCTCGTTTTGGGTGGT
GACGGTATCCGCAAAGATCTGAAAGAGGCCGGATTCTGTTCCGTGGTAAA
CGATCTGCAGCCAAATGACCAGAAAAAAATCGACTTCGTCAGGAGCTTAG
TTCTCGATCCGGATGTGGGAGCTGTTTTGGTGGCCAGAGACGACAACATG
ATAGCGAACGAGTTGCTTGTGGCCTGCAACTATCTTCAAAATCCCAAAGT
CTTGTTCCTTACCACTTGCATTGATGGATTCCAGCCATTTGGGAAAAAGA
GGATCCCAGATGCCGGATCTCTGGCCTCTGCCATCGAGATAATTGTACAA
CGCAAGCCTATCGTTTTGGGCAAACCGAATCAGCGGATTTTGGGCAAGTT
GATGAAGTCTGGCGAAATAAAGCCCGAAAAGACGCTTGTCATTGGAAACT
CGCTTAAATCAGACATTTTATTTGCAAGTATATGTGGTTTCCAATCATTA
TTGGTGGGCTGCGATAACGGAGCGATCGAAAAAGCCGAGAAAATTAAAAA
AGAGGGAGATGAGAAGAAAATGAAACTTGTTCCAGATGCTTTTCTCTCCG
GTCTTGCTTCTTTTGGGAGTATTTATGCATCGCAAGCTTTCTAGACCAT
FMO12138.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:57:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11291-RA | 1280 | CG11291-RA | 71..994 | 9..931 | 4595 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:57:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 22211441..22212184 | 9..752 | 3720 | 100 | Plus |
| 2R | 25286936 | 2R | 22212238..22212418 | 752..931 | 855 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 17:57:01 has no hits.
FMO12138.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-23 10:32:02 Download gff for
FMO12138.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11291-RA | 1..924 | 9..931 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:37:51 Download gff for
FMO12138.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11291-RA | 66..994 | 3..931 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:44:41 Download gff for
FMO12138.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11291-RA | 66..994 | 3..931 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:44:41 Download gff for
FMO12138.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 22211436..22212183 | 3..751 | 99 | -> | Plus |
| 2R | 22212238..22212418 | 752..931 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:37:51 Download gff for
FMO12138.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 18098941..18099688 | 3..751 | 99 | -> | Plus |
| arm_2R | 18099743..18099923 | 752..931 | 99 | | Plus |
