FMO12140.5prime Sequence
1143 bp (1009 high quality bases) assembled on 2012-07-23
> FMO12140.5prime
CAGTCGACATGTCGGACGCACTGGAGGAGCCACCATTGTACCTTACGCCG
CAGTTCTTCAGGCGCACCCTGGAGCACGGATTGCAGCAGCTGGACCTGCA
GGTCATCGGTGTCCAGCTGACCAATCTGACGCGTGGCGGGGAAAACTACT
GCAGCAACATTTACCGAGCTCAGATTAAGTATCGCAATGCCGAGAGCTGC
GCAATGGAGACATCCCTGATCGTCAAGTCCATGCCGGACGAGAAGCAGGC
CATTCTGGCCCGCCTGCACATTTATAACAAGGAGACGCTTTTCTACATGC
ACATCAAGCCCAAGCTGGAGGCACTCATGTGGAGGGCGGTGGATAGTTTC
AGCGCTTGGACTTTGGCTCCCAAGCACTACTATTCCACGACCCAGCCGGA
GCAGACGATCATCCTGGAGGACCTTTGCGCCGCAGGCTATCAGTTGATTT
GCCGCCAGCTGGGTCTGGACTTTGACCACGCCGCTCTGGTGATGGCCAAA
CTGGCCGAATACCATGCCCTCACCATGGTCATGGCCGAACGGGAGCCAGA
AACCATTGTGGACCGCTATCCCTTCGGTCTGCTCCACATGGATGCCATCA
ATTCGGAGCCCTTCAAGCTGCTCTTCGGCACTCAGCTCCTAAAGCTGGCC
GCTCTGGTCGGTGACTGTGAGGGATTCGGTGGGATCACCACAAAGCTCTA
CCGCTACCACGAGCACTTCACCGAACGAGTCCTGAAGGCGGTGTACCCAC
TGCGCGGCAACCATAACGTGCTCAATCACGGCGATCTTTGGGTGAACAAC
ATATTCTTCAAGTACGATGCGGAGTACACGGTGCAGCAGGTGAAGATTAT
TGACTTCCAGCTGTGCTTCTACGGCAGCCTGGCTTCAACATCAAACTACT
TCCTGAACACCAGCTTGGAACTGGAGGTGCTACGTGACCGGCGCAGGAGC
TTGTCCACATCTACTACAGTCCCTGGTGAAATGCCTGAAGCATCTGCCCT
GTTCCAAGGAGCTGCCCAACTATGAGGATATCATGGATGAAAACAAAAAG
CGCGCAACCTACGGTTTCTTTGTGAGGCTTTCGATACCTCCCGCTGTAAG
ACGAGATCGGGGTGTAACCCAGGACATCTTCTGAAGAAAAAAT
FMO12140.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:57:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG7135-RA | 1518 | CG7135-RA | 29..1117 | 9..1096 | 5085 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:57:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 18104110..18104584 | 374..848 | 2345 | 99.6 | Plus |
X | 23542271 | X | 18103681..18104046 | 9..374 | 1830 | 100 | Plus |
X | 23542271 | X | 18104744..18104971 | 849..1074 | 795 | 93.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 17:57:06 has no hits.
FMO12140.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-23 10:32:03 Download gff for
FMO12140.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7135-RA | 1..1089 | 9..1096 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:37:56 Download gff for
FMO12140.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7135-RA | 25..1117 | 1..1096 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:44:43 Download gff for
FMO12140.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG7135-RA | 25..1117 | 1..1096 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:44:43 Download gff for
FMO12140.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 18103677..18104045 | 1..373 | 98 | -> | Plus |
X | 18104110..18104584 | 374..848 | 99 | -> | Plus |
X | 18104744..18104992 | 849..1096 | 92 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:37:56 Download gff for
FMO12140.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 17997710..17998078 | 1..373 | 98 | -> | Plus |
arm_X | 17998143..17998617 | 374..848 | 99 | -> | Plus |
arm_X | 17998777..17999025 | 849..1096 | 92 | | Plus |