FMO12148.5prime Sequence
794 bp (794 high quality bases) assembled on 2012-07-23
> FMO12148.5prime
CAGTCGACATGAATGATCAGCCAGTCGATGGCGTCGTGCGCCTTCGTCTC
AAGGTGGCCCAGTGGATCTACGGCATTGCGGCGCTGTTCATTGTCCTGGC
CATTGGGCTGCTCATCTTGCCGGGCCTGTTCAGACGATACCTCCTGGTTC
CGGATGTAGTGGCTACCTATTGCTTCTTTGTCATCGGATTGGTCACCCTG
TGCGTCTATGTCAACGTCACTTGGCTGCGCCGGAAGTTCCCCTTCAACTG
GATAGTCAGCTGCTGCATAGCAGCCTGTCTGGCACTGGGAACGGTGTGTA
TCCTTTCAAACCAGCGGACGGGACACGTCCTGCTGCTGAGCATGGAGATT
CTTGTCATGATGGCGCTGCTCCTGCTGGTCGGCTCATATCTATTGCCCGA
ATGCCCTGCAATGGCCTACTTGTTCCTCACTTGGTTCATATTCGTTGTGC
TCTCCTCCGTCCTAATGGCCGCCGTTTGTGTACACGTTTCAGATCAGATA
TTCTCCTATGAAGTAGCCACCCACTTTGTGCTCTGGCAAGTTATATGCCC
ATTGATTGTGTTCCAGGCGCAGGTCATATCCGGCTATTGGGAGAATTTAC
CGCCAATTCTGGATAGGCCGCTGTGCTCCACGATGCTCCTGTTCGACTTT
CTCGCCTGCTACATCTTTCTTGACTCCGCCAATGACGTTGGTTTTGAGTT
CTACTACGCTGGCCAGACGGCAAATCAAAAGTTTTTGTCCAGATCCGTTA
AGAGCCAGTGGGAGATGTTCATGGATGCAAGCTTTCTAGACCAT
FMO12148.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:56:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG43779-RA | 836 | CG43779-RA | 1..768 | 9..776 | 3840 | 100 | Plus |
| CG16825-RB | 3020 | CG16825-RB | 1201..1968 | 776..9 | 3840 | 100 | Minus |
| CG16825-RA | 1888 | CG16825-RA | 69..836 | 776..9 | 3840 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:56:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13305988..13306755 | 776..9 | 3840 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 17:56:56 has no hits.
FMO12148.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-23 10:32:01 Download gff for
FMO12148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG15639-RB | 1..768 | 9..776 | 100 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:37:46 Download gff for
FMO12148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16825-RA | 69..841 | 1..776 | 99 | | Minus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:44:38 Download gff for
FMO12148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG16825-RA | 69..841 | 1..776 | 99 | | Minus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:44:38 Download gff for
FMO12148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13305988..13306760 | 1..776 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:37:46 Download gff for
FMO12148.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13305988..13306760 | 1..776 | 99 | | Minus |
