FMO12149.5prime Sequence
254 bp (254 high quality bases) assembled on 2012-07-23
> FMO12149.5prime
CAGTCGACATGAAGTTCTTTGCTCTGTGTGCCTTCCTCCTCATTGCCCTG
GCTACCGTCCAGGCAACTCCCGGTGATCTGCGCCATGTTCCTGTAGGACA
CGGAGGACACCCAGTCAATGCTGGCCACGGACCTGTGGGACACGCTGGTC
CTGTTGGACACGGTCCAGTTGTAGGCCATGGTCCAGTTGTAGGCCATGGT
CCAGTTGTGGGACATGGTGTTCATGGTCATTCTGGCGCAAGCTTTCTAGA
CCAT
FMO12149.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:57:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42500-RB | 440 | CG42500-RB | 99..326 | 9..236 | 1140 | 100 | Plus |
| CG42500-RA | 344 | CG42500-RA | 3..230 | 9..236 | 1140 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:57:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 14152325..14152552 | 236..9 | 1140 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 17:57:27 has no hits.
FMO12149.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-23 10:32:08 Download gff for
FMO12149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42500-RA | 1..245 | 8..250 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:38:10 Download gff for
FMO12149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42500-RA | 1..245 | 8..250 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:44:53 Download gff for
FMO12149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42500-RA | 1..245 | 8..250 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:44:53 Download gff for
FMO12149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 14152310..14152552 | 9..250 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:38:10 Download gff for
FMO12149.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 9978032..9978274 | 9..250 | 97 | | Minus |
