FMO12151.5prime Sequence
383 bp (383 high quality bases) assembled on 2012-07-23
> FMO12151.5prime
CAGTCGACATGCGTTCCTTCATCATCATCGCCCTCTTCGCACTGATTGCC
GTGGCTGCCGCTCAAGGTGGACCCCAGGGCGGACCTCAGGGTGGACCTCA
GGGTGGACCTCAAGGTGGACCACAGGGCGGACCCCAGGGTGGACCTCAAG
GTGGACCCCAGGGTGGTCCTCAGGGAGGACCCCAGGGTGGACCGCAGGGA
GGACCCCAGGGTGGTCCTGGTGGACCCGGTGGACCCGGGGGACCGTGGGG
ACTGCCTCCAAATGCCACTCTTCCCAGCAACAGCACTACCACCACCACCA
CTTCAACGACCACCGAATCCAGCACCAGCACAACCACGGAAGCCAGCACC
GAGTCATCCCCTGCTGCAAGCTTTCTAGACCAT
FMO12151.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:57:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13947-RA | 483 | CG13947-RA | 32..388 | 9..365 | 1785 | 100 | Plus |
| CG13947-RA | 483 | CG13947-RA | 84..193 | 109..218 | 385 | 90 | Plus |
| CG13947-RA | 483 | CG13947-RA | 132..241 | 61..170 | 385 | 90 | Plus |
| CG13947-RA | 483 | CG13947-RA | 92..177 | 129..214 | 250 | 86 | Plus |
| CG13947-RA | 483 | CG13947-RA | 152..237 | 69..154 | 250 | 86 | Plus |
| CG13947-RA | 483 | CG13947-RA | 89..181 | 138..227 | 245 | 84.9 | Plus |
| CG13947-RA | 483 | CG13947-RA | 161..250 | 66..158 | 245 | 84.9 | Plus |
| CG12506-RA | 471 | CG12506-RA | 49..134 | 9..94 | 235 | 84.9 | Plus |
| CG13947-RA | 483 | CG13947-RA | 84..150 | 145..211 | 215 | 88.1 | Plus |
| CG13947-RA | 483 | CG13947-RA | 168..234 | 61..127 | 215 | 88.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:57:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 779204..779560 | 9..365 | 1785 | 100 | Plus |
| 2L | 23513712 | 2L | 779256..779365 | 109..218 | 385 | 90 | Plus |
| 2L | 23513712 | 2L | 779304..779413 | 61..170 | 385 | 90 | Plus |
| 2L | 23513712 | 2L | 779292..779406 | 61..175 | 305 | 84.3 | Plus |
| 2L | 23513712 | 2L | 779256..779370 | 97..211 | 305 | 84.3 | Plus |
| 2L | 23513712 | 2L | 779264..779349 | 129..214 | 250 | 86 | Plus |
| 2L | 23513712 | 2L | 779324..779409 | 69..154 | 250 | 86 | Plus |
| 2L | 23513712 | 2L | 779261..779341 | 138..218 | 240 | 86.4 | Plus |
| 2L | 23513712 | 2L | 779333..779413 | 66..146 | 240 | 86.4 | Plus |
| 2L | 23513712 | 2L | 773595..773680 | 9..94 | 235 | 84.9 | Plus |
| 2L | 23513712 | 2L | 779256..779322 | 145..211 | 215 | 88.1 | Plus |
| 2L | 23513712 | 2L | 779340..779406 | 61..127 | 215 | 88.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 17:57:30 has no hits.
FMO12151.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-23 10:32:09 Download gff for
FMO12151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13947-RA | 1..364 | 7..370 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:38:13 Download gff for
FMO12151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13947-RA | 32..392 | 9..370 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:44:56 Download gff for
FMO12151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13947-RA | 32..392 | 9..370 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:44:56 Download gff for
FMO12151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 779204..779564 | 9..370 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:38:13 Download gff for
FMO12151.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 779204..779564 | 9..370 | 99 | | Plus |
