Clone FMO12152 Report

Search the DGRC for FMO12152

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:121
Well:52
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG30356-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12152.5prime Sequence

473 bp (473 high quality bases) assembled on 2012-07-23

> FMO12152.5prime
CAGTCGACATGGGACGTGCTGTAAAAAATAATAGAGTAAGGTCGGCCCAT
TGCAACAGTGCCGCCAAGGCGACGTCAATCAGTGGACATTCGATGCTAAA
GCAAAACAACGATTGCAATGGACGCAACCCGTTCTTTCAGTTTCTGGCCT
ACTTTCGAAAATGTTCCAACAACTGCCTTGGCCACTTGCCGTCGGATCGG
GTAACTCTAATTGCCGGCAAGGTGTGGAATTACATGAGTCTGTCGGAGAA
AGAACCCTTTATCGCTGCTGCGCGAAGATTTAACTACACGTATCGATCGC
GGAGCAGAAAAGTCAACTGGGTCCTGGCGCAACTGCGAAAATCCGCTGCT
GGGGAAGAATGCCGACCACAGGCACAGTGGATGTTGATGAACTTTTTAAA
GTCTTGGCAGGAATCTGTGGTGAGGAACCTTCTCGACCTGGATCACAATC
AAAACGCAAGCTTTCTAGACCAT

FMO12152.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:57:35
Subject Length Description Subject Range Query Range Score Percent Strand
CG30356-RA 538 CG30356-RA 37..483 9..455 2235 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:57:33
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 8729019..8729465 455..9 2235 100 Minus
Blast to na_te.dros performed on 2014-11-28 17:57:34 has no hits.

FMO12152.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-23 10:32:10 Download gff for FMO12152.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30356-RA 38..487 9..459 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:38:15 Download gff for FMO12152.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30356-RA 37..486 9..459 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:44:58 Download gff for FMO12152.5prime
Subject Subject Range Query Range Percent Splice Strand
CG30356-RA 37..486 9..459 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:44:58 Download gff for FMO12152.5prime
Subject Subject Range Query Range Percent Splice Strand
2R 8729015..8729465 9..459 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:38:15 Download gff for FMO12152.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2R 4616520..4616970 9..459 99   Minus