FMO12153.5prime Sequence
843 bp (843 high quality bases) assembled on 2012-07-23
> FMO12153.5prime
CAGTCGACATGTCCAAGCTGGGTGCTATCTTGTTGGTGGGCTTGTGCCTG
TTTGTGGCCGTGGCCTTGGCCGAGCCACGCCTTCAGCACGTTCAGGGGCG
CAATCAGGTGCAGGGTCAAAGGGCGCAGCAGCATCCCTACCTCTTCCTGT
CAATTCCCAAGGGTCGGGCCAACGCCGGCGCCGTCGTCCAGGGCTTCGAA
ATTGTCGAGGAGGAAGATGATGATCTACATGATGAGGACCAGCACGATGA
CGAGACGGAGGATGACGAGGAACTGGAGCATCAGCTGGGCCTGAACTTTG
CCCGCAGCGGTCTGGCTTACAGGCAGAACCACGCTGATGACGAACAGGAC
GATGATCAGGATCAGGAGCAGGATCACGTTCAGGATGAGCTGCCCAAGAA
GCAGATGATGGTTAACCGGGATCAGGCTGGTGCCATTATGGTGCCCGTTG
GCATTATCGAGATCGAGGGTCAGAGTGTTCTGGACGAGAAGACCGGCAAG
GCGGCTCTCCTAGTGCCTCGTGCCGCCCTAGACGCCATTCCCGATGGCGC
GGTGGTGGCTCTTATGGAGCGATCCGCCTCATCCGTTGATGAAATCGAGG
AAGAGCGCGCCAACCGCGTGGTAGTTCGTCGCCGCAAGAACAACGGACGC
AGGAACATTCGCCGCCGCGGCATCAACAACAACAATATCCGACGCCGCCG
CCCCGCCCAAAGGCGTCGCCGAGTGGGTGGCAACCGCAGGCGCAATGTAC
GCGTCATTCGCCCCCAAGGCGGCAACCGTAGGCGTTGGCAACCAGAGGCG
CCGCGGACAGGTCGTATTCCAGGGTGCAAGCTTTCTAGACCAT
FMO12153.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:57:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG3598-RA | 1047 | CG3598-RA | 102..917 | 9..825 | 4045 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:57:36
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 2937128..2937943 | 9..825 | 4020 | 99.8 | Plus |
Blast to na_te.dros performed 2014-11-28 17:57:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\Het-A | 6610 | Dvir\Het-A HETAVIR 6610bp | 3279..3352 | 641..714 | 118 | 62.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2382..2442 | 632..695 | 115 | 67.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2376..2431 | 632..687 | 109 | 66.1 | Plus |
FMO12153.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-23 10:32:10 Download gff for
FMO12153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3598-RA | 1..816 | 9..825 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:38:18 Download gff for
FMO12153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3598-RA | 102..917 | 9..825 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:45:00 Download gff for
FMO12153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG3598-RA | 102..917 | 9..825 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:45:00 Download gff for
FMO12153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 2937128..2937943 | 9..825 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:38:18 Download gff for
FMO12153.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 2831161..2831976 | 9..825 | 99 | | Plus |
