FMO12169.5prime Sequence
1127 bp (1005 high quality bases) assembled on 2012-07-23
> FMO12169.5prime
CAGTCGACATGTCCGTGTGCGCCCTCAGCCAGCCACAGCAGCCGAATAAA
TCCAATCAGAATCAGAAGCAGAAGAACGGGCCAGCTAGATTACCGGCCTT
GGCAACCGGAAACGGAAGTGCAAGTGCAAGTGCAAGTGGCATAAACCTAA
ACGGCAAAGCCAAGGGCTCCGTAACGCCACCGACACCGCCGCCCTCGCCG
CAGGTACGAATCTACGAGGATTTCGACAGAATGAGCGCCAAGGAGGTGTA
CTACAATGAGGCGGGCAAGAAGGTGACCGTGAAGCTGCTGCACTTCCCCG
ACGTTCCGCCCGAGGAGATATCCAAATTGAAATTCGACGATGACGACGAT
GACGAGGAAGAGGATGGAAATGGAGGCGAAAACGAAAATGGTGACGATGA
CAATGGCGAGGAGGCCGATGAGGATAGCGATTCCGGACGCAGACCTTACA
TCGGCGGACAGCGAGGATGCGGGCCACAAGTCGGAGTCAAGTGGCGGCGC
CAGCAATGCCAACGCTTTGCCCAGTTCCTCCTCCAAGAAGATCTTTCGCC
GCAAACTCTCCGGCAACAATATGCAGCCGCGTAAATGCAGTTTGGCCTTC
GCCCAGGCCCATGGGATTCGCCAGCGAGCGGAGAAGAAGCTATCGATGCC
GACCATTAGCATTACGGCCAATTCGGGTGAGCATGTGGCCCACAATTGTG
GCCTGCGCTTGAATTTGGGCCGCAAGCTGTCGCAACAGCATTCGCTGCCC
CTGGGCTCACCCACCTCGCCAGCATCGCCAACGAGCCCGGGACCACGACG
ATCGCATTCGCCATTGGGCCAAAGTCTGTGTCCCGGCTACATTCAGTACT
CCAAGTCGCTGCTGGAGGTGCCCATGCCGCGGGACTATGGCTACGCCAGC
AGCGATGATCTCAGCTCCGAATGGGACTCGGATGTGTCGACCTCGGCGGC
TGGCTTCGGCAACGGGATCGGGATCCGGTTGCCGCATTCCAAGGCCAGCA
CACCGGCTAAGAAGAAGTTCCGGCTGGTCGAAAAGAATTCGCACATCGTT
CATGGGACGCCCTCTCTTTCCAAAACGTACAAGAAAGCATGCCTATTCAC
ATGTGGTTCAACTGGGTCGGAAACATA
FMO12169.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:58:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| IP3K2-RB | 2807 | CG45017-RB | 260..1352 | 9..1115 | 4955 | 97.6 | Plus |
| IP3K2-RA | 2683 | CG45017-RA | 136..1228 | 9..1115 | 4955 | 97.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:58:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 13325854..13326835 | 9..993 | 4730 | 99.4 | Plus |
Blast to na_te.dros performed on 2014-11-28 17:58:21 has no hits.
FMO12169.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-23 10:32:20 Download gff for
FMO12169.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IP3K2-RB | 247..1308 | 1..1070 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:38:44 Download gff for
FMO12169.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IP3K2-RA | 128..1189 | 1..1070 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:45:22 Download gff for
FMO12169.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| IP3K2-RA | 128..1189 | 1..1070 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:45:22 Download gff for
FMO12169.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 13325846..13326857 | 1..1018 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:38:44 Download gff for
FMO12169.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 13219879..13220890 | 1..1018 | 98 | | Plus |
