FMO12172.5prime Sequence
603 bp (325 high quality bases) assembled on 2012-07-23
> FMO12172.5prime
CAGTCGACATGGACACGAGTGGCGGAAATTTGGATTCCCTAGACGACACG
GAACCATTGCCGGAGCTGAGTTTTGAAGACTTTTTGGAGCCAACGTCGGA
GAAGAGTTCCCAGCACATGGAAATCGAAGCTCTGGACTCAGAGGAAGACA
ATATCGGCGGTGAAGATCTGGCCGATCCGGCCAACGATTCCCTGAACACG
CCGCAGTTTAAGAAGAACGTGGTCCACATACTGGAGGACAAGAGGTTAAA
CTCGTCCGGACTAACCGTTTTGAAGTCGCACGCCATTAAGATGGTGACTG
CCCGGAGGTACTCCTTCGGCCAAGGCGCAAGTTACAGACGTAAAGATACT
AAAACAAAATTGAAACCAATACCCCAGCAGTACGCTAAAGATCGGTAGCA
CGACCCATAGCGACCAAATTCCACACCGGGGCAGCATAACCAAGACTTTT
GGGTCTACTTTGCCCCAAATTAAGAAGAAAAGAAGGGCCAATCCTCCTTT
TGCCCAAAATTCTGGTTCCTGGAAACACAAAGCACCCCTGGGGGGGACAG
GGGTCCCCCAACGGGGGGGAAAAAAAACCCCCCCGGGGGCCTTTTGGGAT
TCC
FMO12172.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:57:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mip120-RA | 3475 | CG6061-RA | 339..867 | 8..552 | 2065 | 94 | Plus |
| mip120-RB | 3221 | CG6061-RB | 110..613 | 33..552 | 1940 | 93.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:57:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13509788..13510197 | 33..449 | 1740 | 97.8 | Plus |
Blast to na_te.dros performed on 2014-11-28 17:57:57 has no hits.
FMO12172.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-23 10:32:15 Download gff for
FMO12172.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mip120-RA | 320..776 | 1..467 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:38:31 Download gff for
FMO12172.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mip120-RA | 332..788 | 1..467 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:45:11 Download gff for
FMO12172.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mip120-RA | 332..788 | 1..467 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:45:11 Download gff for
FMO12172.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13509789..13510212 | 34..467 | 97 | == | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:38:31 Download gff for
FMO12172.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9397294..9397717 | 34..467 | 97 | == | Plus |
