FMO12187.5prime Sequence
1064 bp (995 high quality bases) assembled on 2012-07-23
> FMO12187.5prime
CAGTCGACATGTACTCGTTTTTTGATCATTCAAAAAATCAACCAGATCTT
ACACCAATGGGGTCCTTCTGGCAGCAACATGTGGCCACTCCTAGTAGTTC
AACTCCATTCGATTCACCATTTTTTTCGGCAACACACGGCCTTGTGCAGA
CTCACCCGTCTATAGGTGGAAGCCACTCTGGGCCCGCTCCATTAAATGGC
AATAGCCTTGGGTCTGGAGCTCCATCCTCAATCCTAGCTGGTACTAAGCC
AGCCCTAACCGCTGGAAGCGGTTACCTAAACTCACGCGGGAGTCTACCGA
CCTCTGCACGTTATCCAGCTAATAAGATCACAGGAACCGTCGTGGAACCC
AACCCAAAATCTCCATTCCGCCACTTAGATTTCTCTACTAGTGCAACTGC
CGAGCTGCGGCGCAATCCTGCGCTATCTGCTCCTGATGAATGTGCACGCG
CTTGTCGCGAAGGCGAGCCTCCGAGAATTTGCTACTATCATTTTACGTTG
GAATACTACACAGTATTGGGAGCTGCGTGTCAAGTATGTACTCCAAACGC
AACGAATACGGTTTGGAGCCATTGTCAGTGTGTCTTAGCTGATGGAGTTG
AACGTGGAATTCTAACTGCGAATCGTATGATACCCGGGCCAAGCATTCAA
GTGTGTGAAAACGACAAAGTCGTTATTGATGTGGAGAACCATATGGAGGG
AATGGAAGTAACTATACACTGGCACGGTATATGGCAAACGTGGATCGCAG
TATTATGATGGGGTGCCCTTCGTTACTCAGTGCCCCATTCAGCAGGGTAA
TACCTTCCGTTATCAGTGGACAGGAAACGCTGGGACACATTTTTGGCATG
CTCATACCGGTCTACAGAAACTTAGATGGACTCTACGGCAGCGTCGTGGT
TCGACAGCCACCATCAAGGGACCCTAAACTCCCATTTATATTGATTTTGA
TTTAACAACCCTATAATGCTTATCATTGATGTTGCATGAAGATGCAGCAG
AAAAATATCCTGCCGCTTGCTGTTAAACCAGGGCCAAGATCGGAGTCTAT
GTTGATTAACGAAA
FMO12187.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:59:26
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
laccase2-RF | 2869 | CG42345-RF | 298..1351 | 9..1061 | 4925 | 98.3 | Plus |
laccase2-RG | 3645 | CG42345-RG | 339..1367 | 34..1061 | 4800 | 98.3 | Plus |
laccase2-RE | 3645 | CG32838-RA | 339..1367 | 34..1061 | 4800 | 98.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:59:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 5423750..5424239 | 34..523 | 2450 | 100 | Plus |
2R | 25286936 | 2R | 5435652..5436190 | 524..1061 | 2105 | 95.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 17:59:25 has no hits.
FMO12187.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-23 10:32:33 Download gff for
FMO12187.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG42345-RF | 36..1095 | 1..1061 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:39:22 Download gff for
FMO12187.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
laccase2-RF | 292..1351 | 1..1061 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:45:57 Download gff for
FMO12187.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
laccase2-RF | 292..1351 | 1..1061 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:45:57 Download gff for
FMO12187.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 5423750..5424239 | 34..523 | 100 | -> | Plus |
2R | 5435652..5436190 | 524..1061 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:39:22 Download gff for
FMO12187.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 1311255..1311744 | 34..523 | 100 | -> | Plus |
arm_2R | 1323157..1323695 | 524..1061 | 96 | | Plus |