FMO12191.5prime Sequence
1112 bp (1006 high quality bases) assembled on 2012-07-23
> FMO12191.5prime
CAGTCGACATGGTGACAAAAACGATAAAATCTCTGAATTTAGAGATCAAT
TTCGAAGTGGAGGATGTGCCGTATGAGGAGGAAATCCTTCGAAACGCCTA
CTCCGTAAAACATTGGCTGCGCTACATTGATCACAAAGCGAAGGCGCCGA
ATAATGGTGTTAACATGGTCTATGAGCGTGCTCTGAAAGAGCTTCCTGGC
AGCTATAAGATCTGGCACAATTACCTGAGAACTCGCAGGAAGCAGGTGCG
CGGCAAGATACCCACGGATCCCATGTACGAGGAGGTCAACAGTGCCTTCG
AACGTGCACTGGTGTTTATGCACAAAATGCCACGTATCTGGATGGACTAC
GGTGCCTTCATGACCTCGCAATGCAAGATTACCCGCACCCGGCACGTTTT
CGATCGGGCTCTAAGGGCTCTGCCCATCACGCAGCACGGCAGGATTTGGC
CACTGTATTTGCAGTTTGTACGCCGCTTTGAAATGCCGGAAACAGCACTG
CGAGTCTACCGTCGATATCTGAAACTCTTTCCCGAGGACACAGAGGAATA
TGTGGACTACCTACAGGAAGCAGATCGGCTGGACGAAGCTGCCCAGCAGC
TGGCGCACATCGTCGACAACGAGCACTTCGTTTCCAAACACGGCAAGTCC
AATCATCAGCTGTGGAACGAATTGTGCGACCTCATCTCGAAGAATCCACA
CAAGGTGCACTCCTTGAACGTGGACGCCATCATTCGCGGTGGGCTGCGTC
GCTACACCGATCAGCTGGGCCACCTGTGGAACTCTCTGGCGGATTACTAT
GTGCGTTCCGGCTTATTTGATCGGGCAAGAGATATATACGAGGAAGCCAT
TCAAACTGTGACCACCGTAAGAGACTTCACCCAAGTCTTTGATGATACGC
ACAGTTCGAGGAACTCTCGCTGACAGACGTATGGAGCAGTAGCTGCCAAT
GAGCGGCCACCGAGGAGGACGACAATTGACGTTGAACTGCGGCTCCCAGC
TTCGAATACCTCATGAAGCGCCGGTTTGCCTGCTGTTGAATATGTGCCTC
TCTGCGCCCCGAATCCCGCACAACCGTGCACGAGGTGTCACAGGCGGTGG
AACCTGTTACGA
FMO12191.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:59:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| fand-RA | 2793 | CG6197-RA | 83..1168 | 9..1097 | 5025 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:59:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13593829..13594802 | 54..1023 | 4545 | 99.2 | Plus |
| 2R | 25286936 | 2R | 13593726..13593771 | 9..54 | 230 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 17:59:34 has no hits.
FMO12191.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-23 10:32:35 Download gff for
FMO12191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6197-RA | 78..1135 | 9..1066 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:39:27 Download gff for
FMO12191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6197-RA | 83..1140 | 9..1066 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:46:02 Download gff for
FMO12191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| fand-RA | 83..1140 | 9..1066 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:46:02 Download gff for
FMO12191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13593726..13593770 | 9..53 | 100 | -> | Plus |
| 2R | 13593829..13594841 | 54..1066 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:39:27 Download gff for
FMO12191.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9481231..9481275 | 9..53 | 100 | -> | Plus |
| arm_2R | 9481334..9482346 | 54..1066 | 98 | | Plus |
