FMO12196.5prime Sequence
1097 bp (999 high quality bases) assembled on 2012-07-23
> FMO12196.5prime
CAGTCGACATGTCATTGCAGTTGTTAAAAGCGCTACCCCACCTGCGCAGC
GCCACCACAGCCGTGAGAACTCAGATTGCAAGAACAACGTGGAGCGAGCA
CATTGCCACGAAAGTGTTTTTTAGCACCACTACCACAAAACCTACTCCCT
CCGCACCACCACCACCTCCACCAACGCAACCGCAGCAGCCAGCTGCAACC
ACAAGTTGGGGCACCAAGAAGCAAAATAGAAAGGTAAAACTAAGATCCGC
CGCTGCCGAGTTCATCATGTCGAATCCCGAGATTGAGGCTCAACTTGCCC
CATTGAGGGAACGAGTTCAGGAGCAGGGTAACCTGGTGAGGGATCTCAAG
GCGAAGGGTGCCCCCGAGATCGATGTGAAAAAGGCAGTAGCCGAGCTGAA
GGCACGCAAGAAGCTGCTGGAGGACAAAGAGCTCGCCCTGACCCCCAGTG
TCGTTAGTTTCGATCGCGCGAAGATGGAGGATCTACTCAAGCGTCGCTTC
TTCTACGACCAGAGTTTCGCAATTTATGGCGGCATCACCGGCCAGTACGA
TTTTGGACCCATGGGCTGTGCCCTCAAGTCCAACATTCTGGCCCTATGGC
GTCAGTATTTCGCCCTCGAAGAGCAAATGCTGGAGGTGGACTGCTCTATT
CTGACTCCCGAACCTGTGCTCAAAGCCTCTGGTCACGTGGAGCGTTTCGC
TGATCTGATGGTCAAGGATGTCAAGACCGGCGAGTGCTTCCGCCTGTATC
ATCTCATTAAGCAGGCTTTGGAAAAGCTATCTAAGGCCAAGGATGCAACT
CCCGCCCTGCAGCCGAGTGTGAGGATATTATCATTAACTGGATGGCCTGA
ACAACAGGAATTGGCTGGTGTCCTGCCCAATACACATCAAATCTCCATTA
ACCGGCAATGATTTAACAGACCCGATTGAGTTCAACCTGATGTTTGCCAC
CCAAATTTGACCACTGCTTTGTCAGGGATTCCTGCGGCCCGAAACTGCCC
AAGGTATCTTCGTCAACTTCAAGCGACTGCCTGGATCATCAAGCAGCTCC
CCTTCGCCTGGACTCAATTGCAACTCTTCCGCATTGAATTCACCGAT
FMO12196.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:59:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Aats-gly-RC | 2476 | CG6778-RC | 52..1146 | 9..1088 | 4870 | 97.4 | Plus |
Aats-gly-RB | 2545 | CG6778-RB | 121..1215 | 9..1088 | 4870 | 97.4 | Plus |
Aats-gly-RA | 2457 | CG6778-RA | 43..1127 | 19..1088 | 4820 | 97.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:59:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 15095262..15096291 | 9..1030 | 4645 | 98.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 17:59:15 has no hits.
FMO12196.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-23 10:32:30 Download gff for
FMO12196.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Aats-gly-RB | 76..1125 | 4..1043 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:39:17 Download gff for
FMO12196.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Aats-gly-RB | 116..1165 | 4..1043 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:45:50 Download gff for
FMO12196.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Aats-gly-RB | 116..1165 | 4..1043 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:45:50 Download gff for
FMO12196.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 15095257..15096295 | 4..1035 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:39:17 Download gff for
FMO12196.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 15088357..15089395 | 4..1035 | 98 | -> | Plus |