Clone FMO12196 Report

Search the DGRC for FMO12196

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:121
Well:96
Vector:pMK33-CFH-BD
Associated Gene/TranscriptAats-gly-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12196.5prime Sequence

1097 bp (999 high quality bases) assembled on 2012-07-23

> FMO12196.5prime
CAGTCGACATGTCATTGCAGTTGTTAAAAGCGCTACCCCACCTGCGCAGC
GCCACCACAGCCGTGAGAACTCAGATTGCAAGAACAACGTGGAGCGAGCA
CATTGCCACGAAAGTGTTTTTTAGCACCACTACCACAAAACCTACTCCCT
CCGCACCACCACCACCTCCACCAACGCAACCGCAGCAGCCAGCTGCAACC
ACAAGTTGGGGCACCAAGAAGCAAAATAGAAAGGTAAAACTAAGATCCGC
CGCTGCCGAGTTCATCATGTCGAATCCCGAGATTGAGGCTCAACTTGCCC
CATTGAGGGAACGAGTTCAGGAGCAGGGTAACCTGGTGAGGGATCTCAAG
GCGAAGGGTGCCCCCGAGATCGATGTGAAAAAGGCAGTAGCCGAGCTGAA
GGCACGCAAGAAGCTGCTGGAGGACAAAGAGCTCGCCCTGACCCCCAGTG
TCGTTAGTTTCGATCGCGCGAAGATGGAGGATCTACTCAAGCGTCGCTTC
TTCTACGACCAGAGTTTCGCAATTTATGGCGGCATCACCGGCCAGTACGA
TTTTGGACCCATGGGCTGTGCCCTCAAGTCCAACATTCTGGCCCTATGGC
GTCAGTATTTCGCCCTCGAAGAGCAAATGCTGGAGGTGGACTGCTCTATT
CTGACTCCCGAACCTGTGCTCAAAGCCTCTGGTCACGTGGAGCGTTTCGC
TGATCTGATGGTCAAGGATGTCAAGACCGGCGAGTGCTTCCGCCTGTATC
ATCTCATTAAGCAGGCTTTGGAAAAGCTATCTAAGGCCAAGGATGCAACT
CCCGCCCTGCAGCCGAGTGTGAGGATATTATCATTAACTGGATGGCCTGA
ACAACAGGAATTGGCTGGTGTCCTGCCCAATACACATCAAATCTCCATTA
ACCGGCAATGATTTAACAGACCCGATTGAGTTCAACCTGATGTTTGCCAC
CCAAATTTGACCACTGCTTTGTCAGGGATTCCTGCGGCCCGAAACTGCCC
AAGGTATCTTCGTCAACTTCAAGCGACTGCCTGGATCATCAAGCAGCTCC
CCTTCGCCTGGACTCAATTGCAACTCTTCCGCATTGAATTCACCGAT

FMO12196.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 17:59:16
Subject Length Description Subject Range Query Range Score Percent Strand
Aats-gly-RC 2476 CG6778-RC 52..1146 9..1088 4870 97.4 Plus
Aats-gly-RB 2545 CG6778-RB 121..1215 9..1088 4870 97.4 Plus
Aats-gly-RA 2457 CG6778-RA 43..1127 19..1088 4820 97.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 17:59:14
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 15095262..15096291 9..1030 4645 98.5 Plus
Blast to na_te.dros performed on 2014-11-28 17:59:15 has no hits.

FMO12196.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-07-23 10:32:30 Download gff for FMO12196.5prime
Subject Subject Range Query Range Percent Splice Strand
Aats-gly-RB 76..1125 4..1043 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:39:17 Download gff for FMO12196.5prime
Subject Subject Range Query Range Percent Splice Strand
Aats-gly-RB 116..1165 4..1043 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:45:50 Download gff for FMO12196.5prime
Subject Subject Range Query Range Percent Splice Strand
Aats-gly-RB 116..1165 4..1043 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:45:50 Download gff for FMO12196.5prime
Subject Subject Range Query Range Percent Splice Strand
3L 15095257..15096295 4..1035 98 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:39:17 Download gff for FMO12196.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3L 15088357..15089395 4..1035 98 -> Plus