FMO12202.5prime Sequence
482 bp (367 high quality bases) assembled on 2012-08-29
> FMO12202.5prime
ACTTTGGACCCGCCTGTCCACAGCCTGTGCGATATACGGGTGCCACGAAA
GGAATCATGGACATGGACGAGGATTGCCTCTACTTGAACGTGTATTCGCC
GAAGACTGGTGCTGGTGTGGCTCAAAAAATACCCGGTTATGGTGTACATC
CATGGCGGCGAGTTCATTCGTGGAGCCTCCAACCTATTCCAGGGTCATAT
TCTGGCCTCGTTCTACGACGTGGTCGTGGTGACCCTGAATTACCGCCCTT
GGTGCCCTGGATTCCTATCGACGGGTGATGAGAACTCGCCCGGAAACTAC
GGAATCCTCGATCAGCGATGCGCTACGTTGGGTCTATGACATATTGAGTT
CTTCACGGCGATCGGAATCCATCACTCTATTTGGTCCGGAGCATGAGCGT
CTTCCGCCTGGACTCTGAATGGTTGTCACCAGACGCGACCATTTGGTGCG
TTCGGTGATCGCACAGTCCGGATCGCTCTCTA
FMO12202.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:02:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Gli-RF | 4468 | CG3903-RF | 1195..1673 | 1..475 | 1850 | 94.7 | Plus |
Gli-RE | 4007 | CG3903-RE | 734..1212 | 1..475 | 1850 | 94.7 | Plus |
Gli-RD | 3975 | CG3903-RD | 702..1180 | 1..475 | 1850 | 94.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:02:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 15759072..15759362 | 389..103 | 1065 | 97.3 | Minus |
2L | 23513712 | 2L | 15759417..15759520 | 104..1 | 520 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:02:35 has no hits.
FMO12202.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-29 09:55:57 Download gff for
FMO12202.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gli-RE | 734..1126 | 1..389 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:41:33 Download gff for
FMO12202.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gli-RD | 702..1094 | 1..389 | 97 | == | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:47:51 Download gff for
FMO12202.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Gli-RD | 702..1094 | 1..389 | 97 | == | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:47:51 Download gff for
FMO12202.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 15759072..15759360 | 105..389 | 97 | <- | Minus |
2L | 15759417..15759520 | 1..104 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:41:33 Download gff for
FMO12202.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 15759072..15759360 | 105..389 | 97 | <- | Minus |
arm_2L | 15759417..15759520 | 1..104 | 100 | | Minus |