FMO12210.5prime Sequence
931 bp (839 high quality bases) assembled on 2012-08-29
> FMO12210.5prime
AGTCGACATGTCAAAGGACGCTAATCCCAAGGAGGCGCTCATAAAGGCGG
CTTACGCTGATGTGAATAAGTTCGGCAATAACCAGGAGTTTGACAAGGCT
GTCAAGGCAGTGAATCGCATCCTAGGCGTAGCGCCCGACGATCCCACCGC
CCTGCACTGCAAGGTAGTCTGCCTGGTGCAGCTTTCCAAGTTCGAGGAGG
CCTACAAGTTTATTGAGAAAAATCGACTGTCCTCGCTTTTCTTTGAGAAG
GCCTACTGCGAGTACCAACTTAACAAGCAGCAGCAAGCGCTTAAGACCAT
AGACGATGCGGGTCTGCAGCCCCTGCCTCCGAACCTTAAGGAGCTCCGAA
CCCAGGTCCTGTACCGCTTGGAGCGCTACGATGAGTGCCTAGACTCCTAT
CGCGACATCATTAAGAACACCAGTGACGAGTACGAGGAAGAGCGTCGGAC
CAATCTCAGCGCCGTGGCCGCCAACTTGGCTGTGGATCAGACCAAGGAGG
TGCCCGAGGTGCCGGAAGACACCTACGAGCAGTACTTCAACAGCGCGTGC
ATCCAGGCTAATCGGCAGAAGTATGCTGAAGCCGAGCGCAAGCTGCGCAC
CATCGAGAAGCTCTGTCTTGAGGATGAGTGTGCCTCCCATGAGGAGATCA
TTGAAGAGGTAGACGTCATTCGCGTCCAACTGGCCTATGTCCTCCAACTG
CAGGGCAAGACCAAGGAGGCGTCCAGCATCTACGCGGGACTGCCTGCGTC
ATAAGCCAAAGGACGGAGCCCTGGTGGCCGTGGCAAGCAACAACTTGGTG
GGTGGGTCAATAGGACCAGAACGGTCTTCGAATTCCAAAAATAGATACGC
GCTGCCCTACCCGACTCTGTGGATCTTAGGCTCACCTCGCGCCAAAGCAG
GGTCTAGCCCTCAACAACTGTCTGGCTAGAC
FMO12210.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:02:30
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Srp72-RA | 2149 | CG5434-RA | 115..1029 | 8..924 | 4145 | 97.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:02:28
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 20588998..20589800 | 120..924 | 3410 | 96.3 | Plus |
3R | 32079331 | 3R | 20588825..20588936 | 8..119 | 560 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:02:29 has no hits.
FMO12210.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-29 09:55:56 Download gff for
FMO12210.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Srp72-RA | 108..1030 | 1..931 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:41:29 Download gff for
FMO12210.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Srp72-RA | 112..1034 | 1..931 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:47:49 Download gff for
FMO12210.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Srp72-RA | 112..1034 | 1..931 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:47:49 Download gff for
FMO12210.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 20588822..20588936 | 1..119 | 96 | -> | Plus |
3R | 20588998..20589805 | 120..931 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:41:29 Download gff for
FMO12210.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 16414544..16414658 | 1..119 | 96 | -> | Plus |
arm_3R | 16414720..16415527 | 120..931 | 96 | | Plus |