FMO12246.5prime Sequence
714 bp (686 high quality bases) assembled on 2012-08-29
> FMO12246.5prime
GTCGACATGTCGGCGGCCCGCCTGCCCTACTATCAGCGGGATCAGGAGGA
CGGCCACCAGCGGCGCGCCGCACGCGGCCATCAGCGCGGCTACTACGAGC
GTGGCTCTGGTTCCGGATCCTCCAGACGAGAGCACAGTCGCTACAGTCGC
AGCCGTTCGCGTTCCCGCAGTCGCAGCCGCTCCGCCGAACGCTTTGGCCA
GCGTCGCCGCCACCAGAAACGGCAGTCATCCCGTTACCACAGAGACCGCG
ACTCCAGAGATCGCTCCCGAGATCGCTCCCGAGATCGCTCTAGGGATCGC
GAACGTGATCGCGATAGGGACCACTCAAGGCGCTCCAGCCACTATCGACG
CTCGGAATCGCCGTCCTCTTCTGACATTGGCCATGGATCCAACAACAGTC
AACGAAGAGGCCACCATGCATCATCATCCAGTAAATCGGAGCTAAGCGCC
GTACAGAAGGCAGCCGCTGCAGCTGCCGCCGCCACAAATCAAGTCCAGTT
GGCTGGCAAGAGCAGTGCCGCGTCCGCGGTGGGCGCCTACTACAACCTGG
ACACCGACGAGCCCTTTGACAAGGAGCGCATCCACCGCGAAATGGAGCAG
CAGCTGCGCGAAGCACTGGCCAGGGAGGGCAAAGTGTATTCCGTCGACCA
AGCCTGAGCCTCCATCGCATCCTGTCTCGCCTACGACTGCTCGTTCTTGG
AGCTGTTTAATAAT
FMO12246.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:03:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG18809-RD | 1783 | CG18809-RD | 135..842 | 3..710 | 3375 | 98.6 | Plus |
| CG18809-RC | 2557 | CG18809-RC | 909..1616 | 3..710 | 3375 | 98.6 | Plus |
| CG18809-RB | 2006 | CG18809-RB | 358..1065 | 3..710 | 3375 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:03:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19742165..19742872 | 710..3 | 3325 | 98.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:03:17 has no hits.
FMO12246.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-29 09:56:08 Download gff for
FMO12246.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18809-RB | 359..1071 | 1..714 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:41:58 Download gff for
FMO12246.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18809-RB | 359..1071 | 1..714 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:48:14 Download gff for
FMO12246.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG18809-RB | 356..1068 | 1..714 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:48:14 Download gff for
FMO12246.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19742161..19742872 | 1..714 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:41:58 Download gff for
FMO12246.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19636194..19636905 | 1..714 | 98 | | Minus |
