FMO12263.5prime Sequence
1072 bp (867 high quality bases) assembled on 2012-08-29
> FMO12263.5prime
AGTCGACATGGGAAGGCGATTGCCCAGCTTTTGGCTGCTGCTCCTGCAGA
GCGTGTGTTTCAGCCAGGCCAGCTTTTCGGAGCTAAACAATTCGGATCCC
AAGTTCAGCGGTCCAATCAACAACTCAACAGTTCCCGTGGGACGGGATGC
CCTACTCACGTGTGTTGTCCACGACCTGGTTAGCTTCAAGGTGGCCTGGC
TGCGAGTGGACACGCAGACGATACTGAGCATCCAGAACCACGTCATCACC
AAGAACCATCGCATCTCCATCTCCCACACGGAGCATCGGATCTGGCAGCT
AAAAATACGCGATGTTCAGGAATCGGATCGCGGATGGTACATGTGCCAAA
TCAACACGGATCCCATGAAGAGCCAAATGGGCTACCTGGATGTGGTGGTG
CCGCCAGACATTGTAGACTATCAAACCAGTCAGGATGTGGTTCGTTTCAC
GGGACAGAACGTAACACTCACTTGCAGTGCAACGGGAGTGCCCATGCCCA
CCATCACCTGGCGTCGCGAGGAAGCGACTCCGATACTGATTTCAGACGAC
GGCGATCGGGAAGTGTTCAGCGTGGAGGGTCAGAATCTCACCCTGTGGCA
AGTGCAGCGCTCCCACATGGGCGCCTATCTCTGCATCGCCTCCAACGGAG
TGCCACCCACAGTGTGCAAACGCGTCATGCTGGTGGTGAATTTTGCGCCC
ACGATCTGGACACGCTACGATACCATCTACGTGGGCCTGGGCCAGAAGCT
GACGCTGGAGTGCATCACAGAATCGCAGCCGGCATCGGTGAACTTTCTGG
CTGAGGGATTCGCATTTGCTGCAAGGAGGTTCCTACGAGTCGGTCTCAGT
GGACCACGTCTTCGGGATTGTGATTCCGGATCACCCTGCGTCCAATACCG
AATAGAGATTCCGGAGAGTACATAATGCAGGGCAAAGATGCCGATGGGCT
CAGACTGTATCGGATTATACCCGTGCACATAAGGCCAGCAGCATGGACAG
CACTTCGCATCCAATCTTCCTCCCGGAAGGTCCGTTTCATTTCTCCGAAA
AATAACATCGCAAAATGTCTGG
FMO12263.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:03:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG11320-RB | 1327 | CG11320-RB | 191..1250 | 8..1071 | 4665 | 96.7 | Plus |
CG14010-RB | 2988 | CG14010-RB | 547..835 | 134..422 | 305 | 75 | Plus |
CG14010-RD | 2335 | CG14010-RD | 547..835 | 134..422 | 305 | 75 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:03:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 6617760..6618116 | 692..336 | 1740 | 99.2 | Minus |
2L | 23513712 | 2L | 6618173..6618418 | 338..93 | 1230 | 100 | Minus |
2L | 23513712 | 2L | 6617426..6617706 | 978..693 | 1000 | 94.1 | Minus |
2L | 23513712 | 2L | 6621426..6621510 | 92..8 | 425 | 100 | Minus |
2L | 23513712 | 2L | 5611028..5611090 | 398..336 | 255 | 93.7 | Minus |
2L | 23513712 | 2L | 5640292..5640349 | 393..336 | 215 | 91.4 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:03:50 has no hits.
FMO12263.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-29 09:56:16 Download gff for
FMO12263.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11320-RB | 183..1219 | 1..1041 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:42:17 Download gff for
FMO12263.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11320-RB | 183..1219 | 1..1041 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:48:31 Download gff for
FMO12263.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG11320-RB | 183..1219 | 1..1041 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:48:31 Download gff for
FMO12263.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 6617425..6617706 | 693..978 | 94 | <- | Minus |
2L | 6617760..6618115 | 337..692 | 99 | <- | Minus |
2L | 6618175..6618418 | 93..336 | 100 | <- | Minus |
2L | 6621426..6621516 | 1..92 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:42:17 Download gff for
FMO12263.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 6617425..6617706 | 693..978 | 94 | <- | Minus |
arm_2L | 6617760..6618115 | 337..692 | 99 | <- | Minus |
arm_2L | 6618175..6618418 | 93..336 | 100 | <- | Minus |
arm_2L | 6621426..6621516 | 1..92 | 95 | | Minus |