FMO12265.5prime Sequence
899 bp (817 high quality bases) assembled on 2012-08-29
> FMO12265.5prime
GTCGACATGGCCGAAACGAGCGAAAAGATCAAGTTCCTTGTGGCGGACAC
CACAGCCTTTATAAACGCCGTGCCCCTGAATGAATACGCGGAGCAGGTGC
TCACCGTGCCGGATGTGGTGGCCGAAGTGCGCAACAAGCGCCAGATTCGC
CGCCTCTGCGTTCTGCCCTTCGACCTCCAGGTGCGCGAGCCTCGTCCGGA
GAGCATTAAACACTGCGTGGAGTTCGCCAAGAAAACGGGTGACTACGCGA
GTCTCTCGGGGATCGATCTGAAAGTGATCTCGCTCACCTACGAACTGGAA
GCAGACAACGTGGGCACTGATCACCTGCGCCAGGAGCCTGTGATGGCGCA
GACCATTGCGTCCAAGGATAAACCCGAGGAGATGCAGGATGCTAATAACA
AGAGACTGGTCGGTTGGTACATGCCCGAGGGCGAAGAGGAGGAGTTGGAG
GATTCCGAGGAGGAAGATGATTACTCCCAGGAAGAGGACGATGCTGAAGG
CGATGAGCAGGAGGCAAATGAATCCCCAGACACTGTTAAAGCCGCCATCG
AAGCCCAATTGGCCGGCAAGGAACCATTTGCCAGCGAGACCATCGAAAAA
GGGGGAGGACCAAGACCAGGAGCCCAGTCAGGAGGAGCTGGACAAGCCTG
TTCGAGCAGCTCAAATGCGCACCCAGTGCCGAGGGAAGAGAAAGAGCTCT
CGGAACTGCTCGTTTCCCAGCCGGCCGAAGTAGATGATGAGGTATCCGAG
CCACAAGAAGCCAAACAGAGCCAAAATCTCGACGAGGATGTGGGTGACGA
TGGCTGGATCACGCATTCAAACATCTAGAATGCCAAGAAAGCGCTCGAGG
GCAAAGTGGAAACGGATGAAGTGCCGCCCGTCGCCTGCATGACCACGGA
FMO12265.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:03:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG2972-RB | 1838 | CG2972-RB | 95..981 | 7..896 | 4285 | 99 | Plus |
| CG2972-RA | 1630 | CG2972-RA | 95..981 | 7..896 | 4285 | 99 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:03:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 10083382..10084193 | 82..896 | 3835 | 98.9 | Plus |
| X | 23542271 | X | 10083248..10083323 | 7..82 | 380 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:03:56 has no hits.
FMO12265.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-29 09:56:18 Download gff for
FMO12265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2972-RA | 73..967 | 1..898 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:42:22 Download gff for
FMO12265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2972-RA | 89..983 | 1..898 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:48:34 Download gff for
FMO12265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG2972-RA | 89..983 | 1..898 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:48:34 Download gff for
FMO12265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 10083242..10083322 | 1..81 | 95 | -> | Plus |
| X | 10083382..10084195 | 82..898 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:42:22 Download gff for
FMO12265.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 9977275..9977355 | 1..81 | 95 | -> | Plus |
| arm_X | 9977415..9978228 | 82..898 | 98 | | Plus |
