FMO12267.5prime Sequence
1081 bp (913 high quality bases) assembled on 2012-08-29
> FMO12267.5prime
GTCGACATGCTGGCCACCACCCACATGCTGTACGTGCTGATTGCCACCTG
TGTAATACCCATTTTCGGGGCAGCCCTCAGCAAGACGGTGTTGTACCAGG
CTCCCGATGAGTGCCGCTGGTCCGGCGGCGGGGAGCATGACATCACTCTG
GTCTGTCACCTGAGGACCATCAACTCGGAGCTGGAGAACACCAACTTTAG
CGTGATCCAGCCGCAGAACACGGTGCGCCTGCGTCTGGAGTGCAACGATG
CCCTGTTCTTCCAGAGCAGTCTGAGTCCGGATAGCTTCAGATCGCTGGTG
GAACTCAGGGATCTCACCATCGAGTACTGCAAGCTGGGCAATCTCACGGA
TGGATCTTTCCGTGGTCTGCAGGAGCTGCGAAACCTCACGATTCGCACGC
ACAATGGCGATTGGTCCACAATGTCGCTGGAGATGGCATCCAATATCTTC
GTGGAGTTCCGCCAGCTGGAGCGTTTGGATCTGAGTCTCAACAACATCTG
GCTGATACCGGATGGCATGGTGTGCCCCCTGAAATCCCTGCAGCACCTGA
ATGCTTCGTACAACAAAATTCAGGACATCAGCAACTTTTACTTCAGTGCC
TCGCTCAGTGCGCGGAAGGCACGAGTTTGCGGCTCCACACTGCAAAGTTT
GGATCTGAGTGCCAACAAGATGGTCAGCTTGCCCACGGCAATGTTATCGG
CTCTGGGACGACTGACCCATCTGAATATGGCCAAGAACAGTATGAGTTTT
CTGGCCGATCGCGCCTTCGAGGGTCTTCTTTCGCTGAGGGTTGTGGATCT
TTCGGCGAACCGATTGACCTCTTTGCCGCCAGAGCTCTTCGCGGAGACAA
ACAACTGCAGAAATTTTACTTGAGGAACAATTCCATCATGTACTGGCCCT
AGGAATCTTCGAGAGTTGGCTGACTTTTAGTTCTCGACTTGGCAGCACGA
ACTGATTCCAGTGATCAATGCTGCCACATTTGGGGTCCTCAGCCGACTCA
AGAAGCCTGTACTTATCCGCCTAATAGATCGCCGCTTGAAATCTCACATT
CCTTAGCCCTGCAGCTTCACGATCTGATATC
FMO12267.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:04:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Tollo-RA | 7214 | CG6890-RA | 503..1554 | 7..1049 | 4630 | 96.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:04:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 15236121..15237062 | 7..944 | 4420 | 98.9 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:04:02 has no hits.
FMO12267.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-29 09:56:19 Download gff for
FMO12267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tollo-RA | 481..1483 | 7..1000 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:42:25 Download gff for
FMO12267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tollo-RA | 503..1505 | 7..1000 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:48:38 Download gff for
FMO12267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Tollo-RA | 503..1505 | 7..1000 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:48:38 Download gff for
FMO12267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 15236121..15237132 | 7..1009 | 97 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:42:25 Download gff for
FMO12267.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 15229221..15230232 | 7..1009 | 97 | -> | Plus |
