FMO12270.5prime Sequence
556 bp (556 high quality bases) assembled on 2012-08-29
> FMO12270.5prime
AGTCGACATGGCAATCCAACTGGACAAGATTCTGCAGGACATCGCCAAAG
AAAAGGTGCTGCATCCAAACAATGGCGGCGCCAGCAAGCAGGAGCAGGAG
GAGGCGTGGGCCAGGATCGGGCGTCTCAACAAGCTCTCTGTGCACGAATC
GCGCTCCATCTTCATAGTGCTCCAAAAGAAGTACGAGCAGGAAAAGCTAA
AGGGCAATTCGGCGTGGAAGCTCTTCAGTCTGATGCATCAGATCCATCAG
GAGCCTAAAATCTCAATCAAGGAGGAGAATGATCAAGTACCCATGGAGGA
GGTGGAGGAGTACGAAATGCTGGAGGTGCAGGAGCCTGAGGACGAGGATG
ACGCCCATCAGTACGGACAGCACACCAACTCTACCGGCTCGGCGTCCTCC
GACGGCGAAAGCCCCACAAAGTCACACAGCACCGGTTCGCCAGAAAAGGA
CTATCGGTTGGCGTACGCCAAACCCAACGTCGACACTCCTCGCCCAGCCA
TCGAGGAGAAAAAGCTGCTCAACACACTGGCTAACAACACACCGCGAAGT
AGCTCG
FMO12270.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:03:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Map60-RA | 1814 | CG1825-RA | 163..711 | 8..556 | 2715 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:03:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 9591029..9591300 | 8..279 | 1360 | 100 | Plus |
2R | 25286936 | 2R | 9591365..9591641 | 280..556 | 1355 | 99.3 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:03:47 has no hits.
FMO12270.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-29 09:56:15 Download gff for
FMO12270.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Map60-RA | 198..752 | 1..556 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:42:16 Download gff for
FMO12270.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Map60-RA | 157..711 | 1..556 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:48:29 Download gff for
FMO12270.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Map60-RA | 157..711 | 1..556 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:48:29 Download gff for
FMO12270.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 9591365..9591641 | 280..556 | 99 | | Plus |
2R | 9591023..9591300 | 1..279 | 98 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:42:16 Download gff for
FMO12270.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 5478528..5478805 | 1..279 | 98 | -> | Plus |
arm_2R | 5478870..5479146 | 280..556 | 99 | | Plus |