FMO12276.5prime Sequence
841 bp (649 high quality bases) assembled on 2012-08-29
> FMO12276.5prime
AGTCGACATGAAGGTCACCGTCTGCTTCGGCGACGTTCGCATTCTGGTTC
CCTGTGGTTCCGGCGAACTCCTCGTCCGCGATCTCGTCAAGGAGGCCACG
CGACGCTACATCAAGGCGGCCGGCAAGCCCGATTCCTGGGTGACCGTGAC
GCATCTCCAGACACAGTCGGGCATCCTCGATCCGGATGATTGTGTCCGCG
ACGTGGCCGACGATCGGGAGCAGATATTGGCGCACTTTGATGACCCAGGA
CCCGATCCAGGAGTTCCGCAAGGAGGCGGAGATGGAGCATCGGGCAGTTC
GTCCGTTGGCACCGGTTCGCCGGACATCTTTCGCGATCCCACCAACACGG
AGGCGCCCACCTGTCCGCGGGATCTCTCCACGCCACACTTGGAGGTCACC
AGCACCACATCGGGACCGATGGCTGGACTCGGAGTTGGACTGATGGTGCG
TCGCAGCAGTGATCCCAATCTGCTGGCCTCGCTGAAGGCAGAGGGCAGTA
ACAAACGCTGGTCGGCGGCGGCTCCCCACTACGCTGGCGGGGATTCGCCG
GAGCGCCTGTTTCTTGACAAGGCCGGTGGCCAGTTATCGCCACAGTGGGA
GGAGGAGGACGATCCCAGTCATCAGCTAAAGGAACAGCTGCTACATCAAC
ATGTGGCCCCATGCTGCTAATGGAGGCTCCTCCTCCGGTAACCATCAGCC
CGTTTGCCCGATCCGGTCGCCTGTCGATGCATTTTCTTGTCGATGGCAAT
GGCTACTAGTGGATGGAGGCAGCCGAGAAACTTCCGAATCCGCCGCCAGC
CCAACAGACATATCAGCAGGGTTCTCATCATGCTGGTCTGG
FMO12276.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:04:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| baz-RC | 11877 | CG5055-RC | 1063..1895 | 4..838 | 3945 | 98.3 | Plus |
| baz-RA | 11772 | CG5055-RA | 1063..1895 | 4..838 | 3945 | 98.3 | Plus |
| baz-RD | 15726 | CG5055-RD | 5138..5849 | 125..838 | 3355 | 98.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:04:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 17188990..17189700 | 126..838 | 3300 | 98.2 | Plus |
| X | 23542271 | X | 17161068..17161191 | 4..127 | 605 | 99.2 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:04:21 has no hits.
FMO12276.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-29 09:56:24 Download gff for
FMO12276.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| baz-RA | 1036..1876 | 1..841 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:42:40 Download gff for
FMO12276.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| baz-RA | 1059..1899 | 1..841 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:48:50 Download gff for
FMO12276.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| baz-RA | 1059..1899 | 1..841 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:48:50 Download gff for
FMO12276.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 17161064..17161191 | 1..127 | 98 | -> | Plus |
| X | 17188992..17189704 | 128..841 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:42:40 Download gff for
FMO12276.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 17055097..17055224 | 1..127 | 98 | -> | Plus |
| arm_X | 17083025..17083737 | 128..841 | 98 | | Plus |
