Clone FMO12285 Report

Search the DGRC for FMO12285

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:122
Well:85
Vector:pMK33-CFH-BD
Associated Gene/TranscriptCG2202-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12285.5prime Sequence

794 bp (793 high quality bases) assembled on 2012-08-29

> FMO12285.5prime
TCGACATGGCAACGCCACAGCCGCAGCCGCAGCTGGAGTTGGGTTCGTGC
CAGGAGGCGCAAACTGAGCCGGCGGTCAGCAAGTTGGTTTCCCAGTTAGA
GCCCCTGACCACAATGGACACCGTGGACGCGGAGCGCGTCTGCCGCGTGT
GCCTAAAGGATGTATCGTTGGAGGGGGAGCTACACTTCATCTTCAACGAA
ACGCCCGTCGAGCAGGACGCAAATCTGGCCCGCATCCTGGACGAGTGCAC
CCTGCACCAGTGCGAGCGAAACGACGGCATGCCCCCACATATGTGCAGCT
CCTGCGTGGAGGCGGCCCGCAACGCCTACCGCTTCAAGCGGCACGCGGAG
CGTTCCTACTGCTCGCTGGTCGCATTGCTGGGCCGGTCGCCCCAGCTGAA
GGCGCGAGGAGCCGAGGCGGCCAGTCAGACGGATCAGGTGGCCTTGCTGC
CATGCGAAATGTGCCACGACCAGTTCCTCAACAGCCTGGAGCTCAGGCTG
CACCGCAACCAGGTGCACAGAACGACCAAGGAGGCCACGTCGGCTGGCAC
AGATGGCCTGCCATCCGAGGATTTTAAGTGCAAATTTTTGTCCGCAGCAC
TTTCCCGCATCTCCGACAGCTGCCCACCCATTTGGCGCGCAGCCACGAGC
ATACCGCACGTCTACAGTGCGCCCATTGCCAACGCACCTTTAGCCGGCGG
GATCATTTGCTGCGCCACATACGCAATTCACACCGGGATGTGGAGGAGGA
TCTTTGCGCACCTGGCCGCCGGCGGACGAGAATACTATGAACAG

FMO12285.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:04:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG2202-RA 3363 CG2202-RA 138..926 5..794 3790 99 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:04:43
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 10848894..10849682 5..794 3715 98.9 Plus
Blast to na_te.dros performed on 2014-11-28 18:04:43 has no hits.

FMO12285.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-08-29 09:56:30 Download gff for FMO12285.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2202-RA 128..921 1..794 98   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:42:54 Download gff for FMO12285.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2202-RA 133..926 1..794 98   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:49:04 Download gff for FMO12285.5prime
Subject Subject Range Query Range Percent Splice Strand
CG2202-RA 133..926 1..794 98   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:49:04 Download gff for FMO12285.5prime
Subject Subject Range Query Range Percent Splice Strand
X 10848889..10849682 1..794 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:42:54 Download gff for FMO12285.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 10742922..10743715 1..794 98   Plus