FMO12312.5prime Sequence
769 bp (714 high quality bases) assembled on 2012-10-09
> FMO12312.5prime
GTCGACATGAAGGCGCCACATAGTGCAACATATCAGGATAACTATGCTGA
TGCGGCCATGACAGCCAGGACACGGCCAAGCATGGACATGGATCAGCAGC
GAAATCGAAATCAGGCGGAGCTGAGGCTCCTGCCCGCCCAGCGCACCTCC
ACCTCCGCCTTTGAATCCCCCGACTTGCGGTTCAACAAGGCTCGCCGCCG
GCGGAGAAGCGAGCAAGTGCCTCCCGTGGTCGTGGAATACCGTCGCTCCT
ACCGCGTGCTCATCGTCAGCGCCCTGCTGGTCAGTCTGGCGGCCAGTTTC
GTGACGCTCAGCGCCGGATTCCAGCTAGATGGATCGCAAAACTCCTTCTA
CACCTTCCGCAAGTGGTACACCGGACTGAATGGGACCCTCGAACTGGAGT
TCAAAACGGAACAGCCCAACGGATTGGTTCTCTACACCGACGACGGCGGC
ACCTACGACTTCTTCGAACTGAAGCTGGTGGAAGGAGCACTGCGGCTGAG
ATATAACCTTGGTGGCGGAGCTCAAATCATCACCGTGGGTCGGGAACTGC
ACGACGGCCACTGGCACAAGGTGCAGGTCCTGCGGAACGATGAGCAGACA
TCGCTCATCGTGGACGGCGTCTCCCCAGCAGCGATCGACCAGGGGAAGGA
GTCCAGTTTCGGCAAGTTCGCGAGCAATTCGGACGTCTATGTGGGCGGGT
ATGCCCACCTGGTACGCAACCACCTTGGCCCTGCTCGCCCTGCCATCCGT
TTCTTTCAACCGCGTTTCC
FMO12312.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:08:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Nrx-1-RI | 9643 | CG7050-RI | 1008..1770 | 7..769 | 3530 | 98 | Plus |
| Nrx-1-RH | 9353 | CG7050-RH | 1008..1770 | 7..769 | 3530 | 98 | Plus |
| Nrx-1-RG | 6451 | CG7050-RG | 1305..2067 | 7..769 | 3530 | 98 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:08:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 22470485..22471247 | 7..769 | 3400 | 97.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:08:16 has no hits.
FMO12312.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-09 09:33:13 Download gff for
FMO12312.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nrx-1-RB | 642..1408 | 1..769 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:45:18 Download gff for
FMO12312.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nrx-1-RF | 997..1763 | 1..769 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:51:09 Download gff for
FMO12312.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Nrx-1-RG | 1301..2067 | 1..769 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:51:09 Download gff for
FMO12312.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 22470481..22471247 | 1..769 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:45:18 Download gff for
FMO12312.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 18296203..18296969 | 1..769 | 97 | | Plus |
