FMO12315.5prime Sequence
965 bp (952 high quality bases) assembled on 2012-10-09
> FMO12315.5prime
GTCGACATGGCACGCCCAATTTTTCCGAACCAGCAGAAGATAGCTGAGAA
ACTAATCATCTTGAATGACCGCGGCCTGGGCATTCTTACGCGGATATACA
ACATCAAGAAAGCATGCGGCGACACCAAGTCGAAGCCAGGCTTCCTCTCC
GAGAAGTCGTTGGAATCGAGCATCAAGTTTATCGTGAAGCGGTTCCCCAA
CATCGACGTCAAAGGGCTCAATGCTATTGTAAACATCAAAGCGGAGATTA
TTAAGTCGCTGTCCCTGTATTACCACACATTCGTGGACCTACTTGATTTC
AAGGACAATGTATGCGAACTGCTCACCACGATGGACGCCTGCCAGATTCA
CCTGGACATCACATTGAACTTCGAGCTGACCAAATATTATCTGGACTTGG
TTGTGACCTACGTGTCCTTGATGATTGTTTTGTCTAGGGTCGAGGACCGC
AAGGCAGTTCTGGGCTTGTACAATGCCGCCTACGAGCTGCAAAACAATCA
GGCGGACACGGGCTTCCCCCGCTTGGGGCAGATGATTCTGGACTACGAGG
TCCCCTTAAAAAAGTTGGCCGAGGAATTCATTCCCCACCAGCGCCTGCTA
ACCAGTGCGTTTGCGGTCGCTGACCTCCATCTATGCACTGCGAAACCTGC
CAGCAGACAAGTGGAGGGAAATGCAAAAAGTTGAGTCTGGTAGGCAATCC
GGCCATTCTTCTTAAGGCCGTCCGCACTGACACCATGTCCTGCGAGTACA
TATCCCTGGAGGCAATGGACCGCTGGATAATCTTTGGCTTGCTGCTGAAC
CATCAAATGCTCGGACAGTACCCGGAAGTCAACAAAATCTTGGCTCTCCG
CCCTGGAGTCAGCTGGGTTTGTGCCCTTGTTCCGCGACGAAGTCCTGCAA
ATTCATCCATACATTTCAGGCATCTTTCGCACGAATTAAGGGTTACAGCA
GGCGGACTGGAAAAT
FMO12315.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:08:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Hem-RA | 3777 | CG5837-RA | 209..1154 | 7..956 | 4455 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:08:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 22287042..22287987 | 956..7 | 4325 | 98 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:08:56 has no hits.
FMO12315.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-09 09:33:25 Download gff for
FMO12315.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hem-RA | 206..1166 | 1..965 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:45:44 Download gff for
FMO12315.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hem-RA | 202..1162 | 1..965 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:51:29 Download gff for
FMO12315.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Hem-RA | 202..1162 | 1..965 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:51:29 Download gff for
FMO12315.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 22287032..22287991 | 1..965 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:45:44 Download gff for
FMO12315.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 22280132..22281091 | 1..965 | 97 | | Minus |
