FMO12317.5prime Sequence
1082 bp (904 high quality bases) assembled on 2012-10-09
> FMO12317.5prime
GTCGACATGTCTGATCGTCGTGGCACAAAAGTTGGAACTGGTACGAAGGC
TTTGGAGTATTGGTGCCGAGTTGTGACCCAAGGATATAATGGGGTCAAGG
TGGAGAACATGACCACTTCCTGGCGAAATGGACTTGCCTTCTGCGCCATA
ATACACCACTTTCGGCCGGATCTTATAGATTTCGACCGACTTAAAGCAGA
CGATATCTATGAGAACAACGATTTGGCCTTTACAACGGCCGAGAAATATT
TGGGAATTCCCGCACTGCTCGATGCAGCTGACATGGTTTCGTATGAAGTA
CCTGATAGACTCTCCATACTAACGTATTTATCCCAGTTTTACAAGGTGCT
CGGCAAGAGCCTGAAGCACCCGAAGCCAGAGGAGCCACTTGGCGAAGAGA
GTGAGCCACCGCAAAAGGTGATGCACATTGTTGGGATGCCTCGACGTGAT
AAGTGCCAGAAATGCAACCTTCCTGTTTTTCTCGCCGAAAGGGTCCTTGT
CGGCAAACGGGCTTATCATCGCACATGCTTAAAATGTGCAAGATGTTCGT
CATTGCTCACACCCGGGAGTTTTTATGAAACGGAGGTCAATAACATATAC
TGTTGCGAGACTTGTCCCGATGAAGAAAGTGAACCGGAATCTGACATTTT
AAAGTTAAAGACAACCACTACTGATTCTCCGAATGATAAACAAATGGTGG
CTCAAAGTTCTGATTACTCTGAAGCTGAAGATAAACAAGAAGACCTGTAT
GATAATGATATACGTACTACTGATAAGCCTGAAACTTTCCACCGCCGTCC
AACAAAGATGAACATAATAATGAACTAATAATTATCCGGTAAACCCTATA
TTATCAGAGGAGCGTAAATCTCTTTATCCACTAGACGAGAGATGTGCCTA
TGACATATAATAATCACACTCCTGTAAGCCGCTATACCAGAGACCAAATC
TCTATCTCACTAACGATGACACTTGCTTGCGTTGACAAACATGATCTGCC
GTAAGTCCGAAATGATTCCCAAGAAACTAAATTCTTCGCCCATAATTCTG
AAAGACGCTTGTTGTATGCACACTCGGATATT
FMO12317.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:09:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MICAL-like-RA | 3357 | CG11259-RA | 196..1230 | 7..1009 | 4225 | 95.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:09:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 13014274..13015137 | 868..7 | 4100 | 98.8 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:09:01 has no hits.
FMO12317.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-09 09:33:27 Download gff for
FMO12317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MICAL-like-RA | 166..1140 | 1..954 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:45:48 Download gff for
FMO12317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MICAL-like-RA | 191..1165 | 1..954 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:51:33 Download gff for
FMO12317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MICAL-like-RA | 191..1165 | 1..954 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:51:33 Download gff for
FMO12317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 13014168..13015141 | 1..954 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:45:48 Download gff for
FMO12317.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 13007268..13008241 | 1..954 | 96 | | Minus |
