FMO12322.5prime Sequence
293 bp (210 high quality bases) assembled on 2012-10-09
> FMO12322.5prime
ACCCGCACCGCACGTGAAGTGCAGCAAAACTTTGCCGAGTCGCTCGGCTA
CGCGGAAGAGATAATCTGGGATCTGTTGTCCCATGAACAACATGACGTGC
TAAGGGGCAAACTCTGTCAATTGATTCGTGATTCTCCGGAACCGAAAACT
GCAACGGAAACTGAAAAAGACAGAAAAATCCGGCTGAAGGTCAACGCAGA
TAATGAGCGCGCCCGTCAGATCATTTTCGATTCCGTTTGGCAGCAACGTG
AGTTGGACTTACAGATTGTATATAGTATTATACATTTTTTCGC
FMO12322.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:08:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
pst-RF | 2479 | CG8588-RF | 123..415 | 1..293 | 1435 | 99.3 | Plus |
pst-RG | 2404 | CG8588-RG | 123..370 | 1..248 | 1240 | 100 | Plus |
pst-RE | 2551 | CG8588-RE | 270..517 | 1..248 | 1240 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:08:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 7359632..7359850 | 293..75 | 1065 | 99.1 | Minus |
3L | 28110227 | 3L | 7359919..7359994 | 76..1 | 380 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:08:44 has no hits.
FMO12322.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-09 09:33:22 Download gff for
FMO12322.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pst-RF | 270..562 | 1..293 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:45:38 Download gff for
FMO12322.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pst-RF | 123..415 | 1..293 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:51:23 Download gff for
FMO12322.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
pst-RF | 123..415 | 1..293 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:51:23 Download gff for
FMO12322.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 7359632..7359850 | 75..293 | 99 | <- | Minus |
3L | 7359921..7359994 | 1..74 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:45:38 Download gff for
FMO12322.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 7352732..7352950 | 75..293 | 99 | <- | Minus |
arm_3L | 7353021..7353094 | 1..74 | 100 | | Minus |