FMO12327.5prime Sequence
594 bp (594 high quality bases) assembled on 2012-10-09
> FMO12327.5prime
GTCGACATGAGTCGCGATAGTGATCCCATGAAATGGTACCACGGCAACCT
GTCCCGCGAGGCAGCCGACGAACTGCTAAAGCAGGGTTACGAGGACGGGA
CATTTCTGGTGCGCGAGAGCAGCACAGCGGCCGGGGACTTTGTGCTGAGC
CTGCTCTGCCAGGGTGAGGTGTGTCACTACCAGGTGCGGCGACATGGCGG
CGAGGACGCCTTCTTCTCCATCGACGACAAGGTACAGACGAAGATACTGC
ACGGCCTGGACACGCTCGTCGACTACTATCAGCAGGCGGCCAATGGTCTG
CCCACCAAGCTGACGGTGCCCTTGATCCGCGATCTGCCGCCGCACAACAC
TCGCAGCCACGGAGTGACCAATCTGCTGCATCGCGCCACAAGCAAAAACG
AGAGCAAGGTCGTCTTCTAGCTGCTCAAGTGCGGCTATCGGAATTTCGAT
GCCAATATTCTGGATGGACAGACGGCTCTGCATCTGGCTGCCCTCCACTC
GGACGAGGATATACTTGAAACACCTGTTGAATGCAAAAGGTCCAGGTCAA
CAGCTCCGACTCCTTTGGCTTGCCAGCCATTGCACTACGCCGCT
FMO12327.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:09:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| shark-RA | 3176 | CG18247-RA | 58..642 | 7..594 | 2805 | 98.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:09:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16202144..16202641 | 585..85 | 2295 | 98.6 | Minus |
| 2R | 25286936 | 2R | 16202747..16202827 | 87..7 | 405 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:09:25 has no hits.
FMO12327.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-09 09:33:33 Download gff for
FMO12327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| shark-RA | 57..641 | 7..594 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:46:01 Download gff for
FMO12327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| shark-RA | 58..642 | 7..594 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:51:49 Download gff for
FMO12327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| shark-RA | 58..642 | 7..594 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:51:49 Download gff for
FMO12327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16202144..16202640 | 86..585 | 98 | <- | Minus |
| 2R | 16202749..16202827 | 7..85 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:46:01 Download gff for
FMO12327.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12089649..12090145 | 86..585 | 98 | <- | Minus |
| arm_2R | 12090254..12090332 | 7..85 | 100 | | Minus |
