FMO12337.5prime Sequence
837 bp (678 high quality bases) assembled on 2012-10-09
> FMO12337.5prime
AGTCGACATGAACCACCTGCGGGTGCACAAATTCAAGCTGGGCGGCAAAG
ATAATGCCGCCATGGCCGATTTGCCCCAATCGGAAAACACCACCAACAAT
AACAATAATATCGGAAGCAATAATAATCAAAAAGGCGGTGCAAAAGGATT
TCTGGGAAGGATTAAGCGCTACTCAGTGTTGGGAAATAAACTGGGACGTC
GTAATCTCGGCAGTATGAATTTGAATCCGCCGAATAATGTCGTTGATAAT
TCCGTTTCGCCCACTAAACTCCATACTGGAAGCTACAATATGACCGGTAG
CCATTCCGATGATCATCGCCTGGAAATCGGAGCTCCGATTTTAATATCGA
CTACAACATTGGACACCGACCGTTTCGATGTCACGGAGGCGAGACTCAAA
CAGATTGGCGGCGGCATATCCCAGACCTCCAGTATAGTAAGAACCCTGAC
GCCCATGAGTTCGGATGAGGAGGAGTTTGTGGACGCCAGGAGTAGTCCGC
AACAAATGGAAAGGGATGAGGATCTGCAAATCGCTGATGATCAGGTCGAA
AGAACGATCGCGATCAGTATGGTCATCAATTTCAGCTTCCTAGAAACAAC
TCGTGAAGAAGAGATGGGGGGACTTAAAATATCTATACGATCTGGAGGAA
CCAGAAAATTTTGAGACGCCCAAACACGAATGTGGAGGAAAAGTTCCTGA
CTGCCACCAGGATGTGAAGGGCCTCTTATGCCCATAACCATTGCCTTAAT
CCCCCAATCAGACCACCTTGTATTGCCGCCACCAAGGAAATCGCAATCCC
TTCAAATTTGACTCTCGCCGAAATGAGGGATTCCTGA
FMO12337.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:09:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42388-RG | 5133 | CG42388-RG | 158..960 | 8..804 | 3505 | 96.5 | Plus |
| CG42388-RE | 3916 | CG42388-RE | 197..999 | 8..804 | 3505 | 96.5 | Plus |
| CG42388-RH | 5956 | CG42388-RH | 981..1783 | 8..804 | 3505 | 96.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:09:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 9049259..9050032 | 8..777 | 3255 | 97 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:09:43 has no hits.
FMO12337.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-09 09:33:39 Download gff for
FMO12337.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42388-RG | 150..940 | 1..785 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:46:13 Download gff for
FMO12337.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42388-RH | 973..1763 | 1..785 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:51:58 Download gff for
FMO12337.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42388-RH | 973..1763 | 1..785 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:51:58 Download gff for
FMO12337.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 9049251..9050041 | 1..785 | 96 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:46:13 Download gff for
FMO12337.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8943284..8944074 | 1..785 | 96 | | Plus |
