FMO12343.5prime Sequence
254 bp (198 high quality bases) assembled on 2012-10-09
> FMO12343.5prime
CAATGCCCGGAAACGAGAGATCGAGACAAACCTCTTGGCCTTCAAGTCCC
AGCCAGAGGCGTGGCAACTTTGCCTCCGTGTGGCCACCTCTTCCGACACC
ACGGAGAATCAGTTCCTCTGGTTCTTCAGCACCTCAACCTTGGATCACAC
AATCACGCGGAGATGGACACAGTTGACGTCCACGGACAAGACTTTGCTGC
GGGAGACCCTTTGGAACTCGTATGCCCAACTGGTAGCCACTCCAAATGTG
GTCA
FMO12343.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:10:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| ebo-RC | 4163 | CG3923-RC | 249..499 | 1..251 | 1240 | 99.6 | Plus |
| ebo-RB | 4160 | CG3923-RB | 249..499 | 1..251 | 1240 | 99.6 | Plus |
| ebo-RA | 4142 | CG3923-RA | 249..499 | 1..251 | 1240 | 99.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:10:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 475980..476230 | 251..1 | 1240 | 99.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:10:04 has no hits.
FMO12343.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-09 09:33:44 Download gff for
FMO12343.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Exp6-RA | 262..513 | 1..253 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:46:25 Download gff for
FMO12343.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Exp6-RA | 249..500 | 1..253 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:52:10 Download gff for
FMO12343.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| ebo-RA | 249..500 | 1..253 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:52:10 Download gff for
FMO12343.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 475978..476230 | 1..253 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:46:25 Download gff for
FMO12343.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 370011..370263 | 1..253 | 99 | | Minus |
