FMO12345.5prime Sequence
636 bp (636 high quality bases) assembled on 2012-10-09
> FMO12345.5prime
GTCGACATGAGACGACCCAAGAAGTACGAGTCCGGTGAGGCTACGCAGTA
CATTAGTCGCCGGGCTGCGCTCAGGAAACTCCAGCTCTCGCTGAACGATT
TCCGGAGGCTGTGCATCCTGAAGGGCGTCTATCCCCGGGAACCGAAACAT
AGGCGTAGAGCTCAAAAGGGATCTTCGGAGATCAAGGTGCTTTATCACAC
CAAGGACATTCGCTTTCTGCTGCATGAGTCGATTGTGTGGACGCTGCGTG
ACTACAAGATCTTTGCCAAGAAGAGCAATCGCGATCGTGCCATCAAGGAT
TTCCGCAACCTGAAGCGTCGATTGGCCCTGTTTCCCGAAATCAAACTCGA
TCACATTGTCAAAGAGCGCTATCCTACCTTCATCGATGCCCTCAAGGATC
TGGATGATTGTCTGACGCTGCTCTTTCTGTTCAGCACCTTTCCCTCGCTG
CACTTGATTCCCAGGGAGCAGTCGAATCTGTGCCGCCGTCTGACTATTGA
GTTCCTACACTACGTGATCGCGTCAAAGTCGCTGCGCAAGGTGTTCATCT
CCATCAAAGGCTACTACTTCCTAGCGGAGATCAAGGGCCAGAAGGCCACT
TTGTATTGTGCCGCATTACTATCCGTTCAAGCCTCA
FMO12345.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:10:10
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4364-RA | 2124 | CG4364-RA | 135..760 | 7..633 | 3065 | 99.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:10:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9710347..9710722 | 633..257 | 1790 | 98.9 | Minus |
| 2L | 23513712 | 2L | 9710782..9711017 | 258..23 | 1180 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:10:09 has no hits.
FMO12345.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-09 09:33:45 Download gff for
FMO12345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4364-RA | 127..760 | 1..635 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:46:30 Download gff for
FMO12345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4364-RA | 129..762 | 1..635 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:52:15 Download gff for
FMO12345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4364-RA | 129..762 | 1..635 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:52:15 Download gff for
FMO12345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9710345..9710720 | 259..635 | 98 | <- | Minus |
| 2L | 9710782..9711015 | 25..258 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:46:30 Download gff for
FMO12345.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9710345..9710720 | 259..635 | 98 | <- | Minus |
| arm_2L | 9710782..9711015 | 25..258 | 100 | <- | Minus |
