FMO12347.5prime Sequence
672 bp (669 high quality bases) assembled on 2012-10-09
> FMO12347.5prime
GTCGACATGTTCAAGTTACTCGGCTTGACGCTGCTCATGGCAATGGTGGT
CCTTGGGCGACCGGAGCCACCAGTTAACTCGTATCTACCTCCGTCCGATA
GCTATGGAGCACCGGGTCAGAGTGGTCCCGGCGGCAGGCCGTCGGATTCC
TATGGAGCTCCTGGTGGTGGAAACGGTGGACGGCCCTCAGACAGCTATGG
CGCTCCAGGCCAGGGTCAAGGACAGGGACAAGGACAAGGTGGATATGCAG
GCAAGCCCTCAGATACCTATGGAGCTCCTGGTGGTGGAAATGGCAACGGA
GGTCGTCCATCGAGCAGCTATGGCGCTCCTGGCGGTGGAAACGGTGGTCG
TCCTTCGGATACCTACGGTGCTCCTGGTGGCGGAAATGGTGGACGCCCAT
CGGACACTTATGGTGCTCCTGGTGGTGGTGGAAATGGCAACGGCGGACGA
CCTTCTATTAGCTATGGAGCTCCTGGTCAAGGACAAGGCAACGGAAATGG
CGGTCGCTCATCGAGCAGCTATGGTGCTCCTGGCGGTGGAAACGGCGGTC
GTCCTTCGGATACCTACGGTGCTCCCGGTGGGTGGAAACGGTGGTCGTCC
CTTCCGGATACTTACGGCGCTCCTGGTGGCGGCAATAATGGCGGTCGTCC
CCTCAAGCAGCTACGGCGCTCC
FMO12347.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:09:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| resilin-RB | 2666 | CG15920-RB | 644..1305 | 7..672 | 3185 | 98.9 | Plus |
| resilin-RA | 2281 | CG15920-RA | 124..785 | 7..672 | 3185 | 98.9 | Plus |
| resilin-RB | 2666 | CG15920-RB | 1099..1263 | 267..425 | 455 | 85.5 | Plus |
| resilin-RA | 2281 | CG15920-RA | 579..743 | 267..425 | 455 | 85.5 | Plus |
| resilin-RB | 2666 | CG15920-RB | 904..1062 | 462..629 | 410 | 84.5 | Plus |
| resilin-RA | 2281 | CG15920-RA | 384..542 | 462..629 | 410 | 84.5 | Plus |
| resilin-RB | 2666 | CG15920-RB | 1196..1464 | 262..533 | 365 | 76.6 | Plus |
| resilin-RA | 2281 | CG15920-RA | 676..944 | 262..533 | 365 | 76.6 | Plus |
| resilin-RB | 2666 | CG15920-RB | 1241..1359 | 262..383 | 315 | 84.4 | Plus |
| resilin-RA | 2281 | CG15920-RA | 721..839 | 262..383 | 315 | 84.4 | Plus |
| resilin-RB | 2666 | CG15920-RB | 1156..1314 | 267..428 | 285 | 79.4 | Plus |
| resilin-RA | 2281 | CG15920-RA | 636..794 | 267..428 | 285 | 79.4 | Plus |
| resilin-RB | 2666 | CG15920-RB | 1060..1356 | 279..581 | 240 | 73.7 | Plus |
| resilin-RA | 2281 | CG15920-RA | 540..836 | 279..581 | 240 | 73.7 | Plus |
| resilin-RB | 2666 | CG15920-RB | 1175..1311 | 493..629 | 230 | 79.1 | Plus |
| resilin-RA | 2281 | CG15920-RA | 655..791 | 493..629 | 230 | 79.1 | Plus |
| resilin-RB | 2666 | CG15920-RB | 904..1024 | 519..636 | 220 | 80.6 | Plus |
| resilin-RA | 2281 | CG15920-RA | 384..504 | 519..636 | 220 | 80.6 | Plus |
| resilin-RB | 2666 | CG15920-RB | 1481..1555 | 259..333 | 195 | 84 | Plus |
| resilin-RA | 2281 | CG15920-RA | 961..1035 | 259..333 | 195 | 84 | Plus |
| resilin-RB | 2666 | CG15920-RB | 904..1017 | 318..425 | 185 | 78.1 | Plus |
| resilin-RB | 2666 | CG15920-RB | 955..1062 | 267..380 | 185 | 78.1 | Plus |
| resilin-RB | 2666 | CG15920-RB | 1274..1359 | 544..632 | 185 | 82 | Plus |
| resilin-RA | 2281 | CG15920-RA | 435..542 | 267..380 | 185 | 78.1 | Plus |
| resilin-RA | 2281 | CG15920-RA | 754..839 | 544..632 | 185 | 82 | Plus |
| resilin-RA | 2281 | CG15920-RA | 384..497 | 318..425 | 185 | 78.1 | Plus |
| resilin-RB | 2666 | CG15920-RB | 1294..1350 | 150..206 | 180 | 87.7 | Plus |
| resilin-RA | 2281 | CG15920-RA | 774..830 | 150..206 | 180 | 87.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:09:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 16780548..16781209 | 7..672 | 3105 | 98.8 | Plus |
| 2R | 25286936 | 2R | 16781043..16781167 | 301..425 | 430 | 89.6 | Plus |
| 2R | 25286936 | 2R | 16780842..16780966 | 502..629 | 330 | 87.5 | Plus |
| 2R | 25286936 | 2R | 16781145..16781263 | 262..383 | 290 | 84.4 | Plus |
| 2R | 25286936 | 2R | 16781198..16781326 | 363..488 | 280 | 82.9 | Plus |
| 2R | 25286936 | 2R | 16781078..16781174 | 291..387 | 275 | 85.6 | Plus |
| 2R | 25286936 | 2R | 16781079..16781167 | 493..581 | 220 | 83.1 | Plus |
| 2R | 25286936 | 2R | 16781175..16781260 | 496..581 | 220 | 83.7 | Plus |
| 2R | 25286936 | 2R | 16781385..16781459 | 259..333 | 195 | 84 | Plus |
| 2R | 25286936 | 2R | 16780832..16780921 | 336..425 | 180 | 80 | Plus |
| 2R | 25286936 | 2R | 16780877..16780966 | 291..380 | 180 | 80 | Plus |
| 2R | 25286936 | 2R | 16780964..16781017 | 279..332 | 180 | 88.9 | Plus |
| 2R | 25286936 | 2R | 16781198..16781254 | 150..206 | 180 | 87.7 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:09:40 has no hits.
FMO12347.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-09 09:33:38 Download gff for
FMO12347.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| resilin-RB | 637..1305 | 1..672 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:46:11 Download gff for
FMO12347.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| resilin-RA | 117..785 | 1..672 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:51:57 Download gff for
FMO12347.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| resilin-RA | 117..785 | 1..672 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:51:57 Download gff for
FMO12347.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 16780541..16781209 | 1..672 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:46:11 Download gff for
FMO12347.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 12668046..12668714 | 1..672 | 98 | | Plus |
