FMO12353.5prime Sequence
716 bp (715 high quality bases) assembled on 2012-10-09
> FMO12353.5prime
AGTCGACATGACGGAGTACTGGAAATCAAACGAGCGCAAGTTCTGCGACT
TCTGCAAATGCTGGCTGAGCGACAACAAGGCGAGCGTCGCCTTCCACGAG
AGTGGCAAGCGGCACAAGATGAATGTGGCCAAGCGGATCACGGACATCAG
TCGCAACAGCGAGAAATCGGAGCGGGAGCGCCAGAAAATGGACGCGGAGA
TCCGCAAGATGGAGGAGGCGGCCATGAAGTCGTACGCACAGGATGTCCAT
TCGCGCGGTGACATGACCGCCAGGTCCATTAACACGGTAATGAGGGCCAC
CGCCACTGCTGCCGCCTCAGGCGGAGCTCACTCCTTCGCCGGAAGATCAC
GCCAAGTGGACCCCATGCGCCTGGAAGGATTGTCCGACGAAGAAGAAGAC
CAGAGGCGGGTGGCTCCCGGCAAGGTAACAAGCGACGCAGCCGTGCCCGA
GGCATCCCTCTGGGTGGAGGGCAAGTCGGACGAGGGACACACCTACTATT
GGAACGTGAAGACCAATGAATCCGTGTGGAAGCCGCCGAAAGAGGGCTAT
CTGTCCTACGAGGAGTACGAGCGCATCAACCAGCTGGCCATCGACCAGCA
GCAGATCTCCCAGGCCGAGGAATCGCTGATATTCCGCGCCAATGTCGACG
AGGAAGTGGCGAGGGTGAACCGAGAGAAGATGATAGCCTTTCCGCAAGAA
CGGACAATCCCAAGGA
FMO12353.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:10:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4291-RB | 1310 | CG4291-RB | 101..808 | 7..716 | 3455 | 99.3 | Plus |
| CG4291-RA | 1245 | CG4291-RA | 101..808 | 7..716 | 3455 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:10:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 851811..852443 | 716..82 | 3030 | 99.2 | Minus |
| 2L | 23513712 | 2L | 852499..852575 | 82..6 | 370 | 98.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:10:17 has no hits.
FMO12353.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-09 09:33:48 Download gff for
FMO12353.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4291-RA | 74..786 | 1..715 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:46:35 Download gff for
FMO12353.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4291-RA | 95..807 | 1..715 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:52:18 Download gff for
FMO12353.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4291-RA | 95..807 | 1..715 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:52:18 Download gff for
FMO12353.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 851812..852442 | 83..715 | 99 | <- | Minus |
| 2L | 852499..852581 | 1..82 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:46:35 Download gff for
FMO12353.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 851812..852442 | 83..715 | 99 | <- | Minus |
| arm_2L | 852499..852581 | 1..82 | 95 | | Minus |
