FMO12358.5prime Sequence
431 bp (431 high quality bases) assembled on 2012-10-09
> FMO12358.5prime
CGACATGTCTGCCTACGAGAAAATGCCGGCGAAGGCGCCACGACGCCTCT
CACCCATATGGTTTCTGGTGGTCACGTTTCTTCTCTTTGCCACCACCTTA
ACGGCGCTGGCCGTGATCGAAGCTGGACGGGCACAGAGCAACGCGGGCGG
AGAAAGCGATCTCCTAATCCTTACGCGCATGTGGAATCATTTCAAGTCCG
GTGCCGATAATGATACAGAAATTGCCACGGTGGAGCGAATTGCTAGGGAT
GCCGGAAATGCAAGCAATCCGAGTGCATCCGCATCGCAGCAGGGCAGAAA
CTTCTACGAGGAGCAGCAGGCGGTGGTGGTGAATGCAGAGAGCATGGATT
CTCCCGTGTTGGGACAACGCCAGGATGCCTACGGTCCGCCGCAGAGTCGC
GAGGATTCCTACGAGCAGGATCCGTACTACG
FMO12358.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:10:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6785-RC | 1889 | CG6785-RC | 119..545 | 5..431 | 2135 | 100 | Plus |
| CG6785-RB | 2611 | CG6785-RB | 841..1267 | 5..431 | 2135 | 100 | Plus |
| CG6785-RA | 3980 | CG6785-RA | 2210..2636 | 5..431 | 2135 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:10:11
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12042565..12042991 | 431..5 | 2135 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:10:12 has no hits.
FMO12358.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-09 09:33:46 Download gff for
FMO12358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6785-RA | 2204..2636 | 1..431 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:46:32 Download gff for
FMO12358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6785-RA | 2204..2636 | 1..431 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:52:16 Download gff for
FMO12358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6785-RA | 2204..2636 | 1..431 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:52:16 Download gff for
FMO12358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12042565..12042992 | 1..431 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:46:32 Download gff for
FMO12358.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12042565..12042992 | 1..431 | 99 | | Minus |
