FMO12361.5prime Sequence
673 bp (639 high quality bases) assembled on 2012-10-09
> FMO12361.5prime
TCGACATGAAATACTTGTATCTTCTTTTGTTGGCCACCTCAGTAGAGAGC
GGGTTTTGGGAGGACTTTTATCGAATTCTAGCATCGCAGAATGCAAAAAG
GAACCTCATTTATTCGCCGATATCTGCTGAGATTATTATGAGCATGGTTT
ATATGGCATCAGGTGGAAAAACGTTCGAAGAGCTTAGAAACGTTTTGAAA
TTTTCTGAGAACAAAACACTTGTGGCAAACAACTATCGTAGCCTTTTAAG
CGATCTTAAGCGCCGCGAAACGTTTATTATCCTGCATATGGCAAACCGGA
TATATGTGAACAAGAAATATTGCCTTGTACCGGAATTTAACCAGTTGGCA
CGAAAGGCCTTCAAGGCCAAAGCCAAGTCGATCCGTCTAGACGATCCAGT
CAGTGCGTCTGCGATAGTCAATAGCTGGATATTAAATCTAACGCGTGGCA
TGATCTGGAACATAGTTTTACCTAAGGACTTTAATTCTGATACAATGGCG
TTTCTGGTGAATGCAATCTACTTCAAGGGCCAGTGGCTGTATAACTTCAA
GGCCGACCAAACTCATATAGCCGACTTCTATGTATCAGCTACCGAAATTA
TCCCGTTGAAGATGATGACTTTGTCTGCATCCCTACTATCAGATACATCG
ATTGACATTGATGCAAGATTAAT
FMO12361.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:10:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Spn28B-RB | 1186 | CG6717-RB | 12..678 | 6..671 | 3145 | 98.4 | Plus |
| Spn28B-RA | 1248 | CG6717-RA | 12..678 | 6..671 | 3145 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:10:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 7582005..7582652 | 19..666 | 3025 | 98.5 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:10:36 has no hits.
FMO12361.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-09 09:33:53 Download gff for
FMO12361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spn7-RA | 1..671 | 4..673 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:46:47 Download gff for
FMO12361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spn28B-RA | 7..679 | 1..673 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:52:28 Download gff for
FMO12361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Spn28B-RA | 7..679 | 1..673 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:52:28 Download gff for
FMO12361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 7582005..7582659 | 19..673 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:46:47 Download gff for
FMO12361.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 7582005..7582659 | 19..673 | 98 | | Plus |
