FMO12362.5prime Sequence
470 bp (469 high quality bases) assembled on 2012-10-09
> FMO12362.5prime
TCGACATGAGCTGGCTGATCTCAGCGGTGTTCCTCCTGCTGTCCCTTTGT
GCCTTCTCGATGGGCCAGGACACGATTTCGGCGATGTGCCTCTCGGACGA
ACGGTGCACGTCTTTGAAGCGTTGCGAAGACTCGGATGATTCCGGTCGAA
GGGGAATTAGGCCACGCAGCTCACGCATCTGCGGCACCCAAAGGGTCTGC
TGCGAGAAGGCCCAGCTGGACAGCTATGACAGATGGCTGGTTGAGAGAAC
CACAACAGTGCCTTCAACAATTCGAAACAAGGTATCCAGTGTCCTGGAAC
CGCCGCCGAACGAGAGCTGCGGACAGAACATGGAGTGTGTACCCAGAAAG
TTGTGCCGCGACAATATTATCAACGACTCGGGTATCAGCCTGATCAATCC
GAGGATTAGCCCGATTCAGTGCAGCAAGTCCTTGTACCGCTGTTGCGTCT
TTTATCAAAAGGTGGATGAC
FMO12362.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:10:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8586-RC | 2473 | CG8586-RC | 100..564 | 6..470 | 2250 | 98.9 | Plus |
| CG8586-RB | 1625 | CG8586-RB | 195..659 | 6..470 | 2250 | 98.9 | Plus |
| CG8586-RA | 1530 | CG8586-RA | 100..564 | 6..470 | 2250 | 98.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:10:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 8694778..8695235 | 463..6 | 2215 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:10:39 has no hits.
FMO12362.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-09 09:33:54 Download gff for
FMO12362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8586-RA | 93..563 | 1..470 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:46:48 Download gff for
FMO12362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8586-RA | 94..564 | 1..470 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:52:30 Download gff for
FMO12362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8586-RA | 94..564 | 1..470 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:52:30 Download gff for
FMO12362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 8694778..8695240 | 1..463 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:46:48 Download gff for
FMO12362.5prime
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 4582283..4582745 | 1..463 | 98 | | Minus |
