FMO12367.5prime Sequence
271 bp (270 high quality bases) assembled on 2012-10-09
> FMO12367.5prime
GTCGACATGAACTACAATCCAAATCCGGGTATGCGGAACCGTAAGTGGGA
GAACTCCTCAGCTGCCGGTCGCCCAAGGCCGCCGAAGCGTGTGAGTGATG
TTAACGCCATGTCTACCCTCGGCTCCGATGATGGGCGGTGGCGCCACCTT
CATGGCCCCGCCCACCGGCCCCGGAATACTAGATCCCAATATGTACGGAG
CACCTGCTCCGGCCCCGGTCAACAGCTATGGCTTCGACCCCAATCTCGGC
CAGCCCTCGCAGCACATTCAT
FMO12367.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:10:45
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG5484-RC | 1522 | CG5484-RC | 108..370 | 7..270 | 1265 | 98.9 | Plus |
CG5484-RA | 1507 | CG5484-RA | 137..355 | 51..270 | 1030 | 98.2 | Plus |
CG5484-RB | 1495 | CG5484-RB | 130..343 | 56..270 | 1020 | 98.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:10:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 26718328..26718541 | 56..270 | 995 | 98.6 | Plus |
3R | 32079331 | 3R | 26717978..26718026 | 7..55 | 245 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:10:44 has no hits.
FMO12367.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-09 09:33:56 Download gff for
FMO12367.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5484-RC | 126..393 | 1..271 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:46:51 Download gff for
FMO12367.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5484-RC | 103..370 | 1..271 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:52:32 Download gff for
FMO12367.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG5484-RC | 103..370 | 1..271 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:52:32 Download gff for
FMO12367.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 26717973..26718026 | 1..55 | 92 | -> | Plus |
3R | 26718328..26718541 | 56..271 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:46:51 Download gff for
FMO12367.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 22543695..22543748 | 1..55 | 92 | -> | Plus |
arm_3R | 22544050..22544263 | 56..271 | 98 | | Plus |