FMO12368.5prime Sequence
752 bp (752 high quality bases) assembled on 2012-10-09
> FMO12368.5prime
GTCGACATGGCAGCTGTACACAATCGGACACATTTTATCTGCGGTGGCAC
GCTGATTCATAAGCGATTCGTTTTGACAGCTGCGCATTGCATAGTTGACC
AAGACGTCCAATCAGTGAGTTTGGGTGCCTACAACAAGAGTGATCCTGCA
GATCGGAAAGACGTCATAACAGCAGTAGTGCATAGTTCGTTTGACGTTCG
TGCTTCCTATGAAAATGACATTGGCCTGCTAAAGCTGTCCAGCGACGTTA
TCTTTAATGCCCTTATTCGTCCAATCTGCATCGTTTTGAACAAGAGTATG
GCCAACCATATGCGCAACATGCGGACCTTTAAAGCCTTTGGATGGGGAAC
ATTACGCGGCAACAAGACATCCGATATACTTCAGACAATCATCCTTAATC
ATTTGGATCGTGAAGAGTGCTATATGGAATTGTCTGTTTATCCCAGTGAG
AAGCAGATATGCGCTGGTGTACCTTCCGGAGACACCTGTGGGGGCGATTC
TGGTGGTCCCCCTGACAAACGATGTGTTTATTCAAGGTATCGGCAATCGG
GAAGTTCAGTTCGGGATCATCAGCGTTGGCAAAACATCCTGCGATGGACA
GGGAGTGTATACCGATTTGATGAGCTTTGCGGACTGGATTAAGATGACAA
TAGAGAGGTTATCTATCGAGGATGAACCCAGTCTGCACCCTTCTACAAAT
TATACCCCAGCAGCTAGATGTTTTTTGTACAACGACTGTGGCGGCGCCAA
CA
FMO12368.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:10:48
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30187-RC | 1573 | CG30187-RC | 166..913 | 7..752 | 3630 | 99.3 | Plus |
CG30187-RD | 1606 | CG30187-RD | 166..913 | 7..752 | 3630 | 99.3 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:10:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 22917703..22918198 | 752..259 | 2270 | 99 | Minus |
2R | 25286936 | 2R | 22918260..22918408 | 259..111 | 745 | 100 | Minus |
2R | 25286936 | 2R | 22918567..22918625 | 65..7 | 295 | 100 | Minus |
2R | 25286936 | 2R | 22918466..22918511 | 110..65 | 230 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:10:47 has no hits.
FMO12368.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-09 09:33:56 Download gff for
FMO12368.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30187-RC | 136..888 | 1..751 | 98 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:46:54 Download gff for
FMO12368.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30187-RD | 160..912 | 1..751 | 98 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:52:34 Download gff for
FMO12368.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30187-RD | 160..912 | 1..751 | 98 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:52:34 Download gff for
FMO12368.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 22917704..22918197 | 260..751 | 98 | <- | Minus |
2R | 22918260..22918408 | 111..259 | 100 | <- | Minus |
2R | 22918466..22918511 | 65..110 | 100 | <- | Minus |
2R | 22918568..22918631 | 1..64 | 95 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:46:54 Download gff for
FMO12368.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 18805227..18805720 | 260..751 | 98 | <- | Minus |
arm_2R | 18805783..18805931 | 111..259 | 100 | <- | Minus |
arm_2R | 18805989..18806034 | 65..110 | 100 | <- | Minus |
arm_2R | 18806091..18806154 | 1..64 | 95 | | Minus |