FMO12371.5prime Sequence
772 bp (626 high quality bases) assembled on 2012-10-09
> FMO12371.5prime
GTCGACATGACGCAGCTAGAGATTTCCAAGAAGTCGGAAAAACCAGCGGA
AAAACCGGCGGAGCAATGGGGAAATGGACTCGAATTTCTTTTCTCCTGCA
TTTCATTATCCGTGGGATTGGGGAATATCTGGCGTTTTCCCTACATTGCC
TTCCAGAATGGCGGCGGTACCTTTGTGATACCGTACCTGATTGCCCTCCT
GGTAATTGGACGGCCTGTCTACTATCTGGAGATATCCCTGGGCCAGTTCA
CGGGTCGCGGCGTGGTCAAGGCCTTCGATATGGCTCCCCTGCTCAAGGGC
GTGGCATTGGGTCAAGTCCTGGCCACAGCCGCCTCCATCACATACTACTC
CAGCATTATGGCTTTGACTCTACGATTCTGGCTGGCCTCCTTCGGCTCCG
AGCTGCCATGGAGCAGGTGCTGGGAGAGCTGGGGCACCGATTGCCACGAC
TTTAATGCTCAAAATAGCAGTGGAAAAAATGTCACCGGCACAGCTGTACT
TTGAACGTGAGATCCTTCATGAGGTGCCCAACATAGACAACGGACTGAGT
CTGCCCAACTGGCAACTGGTGGCCTGTTTGGCGATTGCTTGCCTGGTCAT
CGGAGGAGTCCTCATTCGCGGCATTAAGAGCAGTGCCAAGGCGGCTAATT
TCCTGGGCGAATTCCCCTATGAGGAGCTGCTCATCTGCTCTTGAGAGCCG
TACCCTGCATGAGCCATCAATGCATTATATACTTCCTCAGCACATGCTGA
GAGCGCTGAATCCACTCGTTTG
FMO12371.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:10:34
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
List-RD | 1867 | CG15088-RD | 38..815 | 2..772 | 3415 | 96.7 | Plus |
List-RC | 1827 | CG15088-RC | 38..815 | 2..772 | 3415 | 96.7 | Plus |
CG8850-RA | 2086 | CG8850-RA | 260..400 | 91..231 | 210 | 76.6 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:10:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 18729743..18730244 | 504..2 | 2405 | 99 | Minus |
2R | 25286936 | 2R | 18729306..18729544 | 739..505 | 830 | 93.7 | Minus |
2R | 25286936 | 2R | 12300721..12300861 | 231..91 | 210 | 76.6 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:10:33 has no hits.
FMO12371.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-09 09:33:52 Download gff for
FMO12371.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG15088-RD | 14..792 | 1..772 | 96 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:46:44 Download gff for
FMO12371.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
List-RD | 37..815 | 1..772 | 96 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:52:27 Download gff for
FMO12371.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
List-RC | 37..815 | 1..772 | 96 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:52:27 Download gff for
FMO12371.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 18729269..18729544 | 505..772 | 92 | <- | Minus |
2R | 18729743..18730244 | 1..504 | 98 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:46:44 Download gff for
FMO12371.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 14616774..14617049 | 505..772 | 92 | <- | Minus |
arm_2R | 14617248..14617749 | 1..504 | 98 | | Minus |