Clone FMO12373 Report

Search the DGRC for FMO12373

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:123
Well:73
Vector:pMK33-CFH-BD
Associated Gene/TranscriptRhoGAP16F-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12373.5prime Sequence

551 bp (550 high quality bases) assembled on 2012-10-09

> FMO12373.5prime
GTCGACATGCAGACGACGACAAGTCAGCGGCCAGTAACGCCTGGCACTCC
AGACTCGGCGCATATCGTAATCGGCGCCGCGGGATTCGTGGCACACGAGA
GACGCCAGCCCGGAAAGACCCTGATGAATTGCTTTCGCGATCGCTCCACG
ACGTCGTCGTCATCGTCGCAGGCCCAACACGCCTATGTGCGCGGCCACAG
CGTCACCTCGAGCACTCTGTTTCGCCTGGAGGGCAGTGGTGGCTCCAATT
GCACCTTGGACAAGGCGGGCAAGCAGGATACCGGGCGGCCCGAGGCGGTC
GTCCTACTCAGAGAGCTGAAAACCAGACCCAACAAGCTGGCTCTGCTCAA
GAGCAGCAGCAGCAAGGATCTGACCCGCCTGTTCCTGGACGATTCAACCA
ACACAGCCGTGCTGGTGTCCCACACCACTATAGATGTCTGCTCCTCAAAT
TCCTTCTCTGGCGGCAGTCCGGCGGTGGGCTGGTCCAAGTCCGGCAGGGA
TCGCCGCAATGGACTGGAGTGCTGCAGCCTTGCTCCAAAGCGTTGGCACG
A

FMO12373.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:10:51
Subject Length Description Subject Range Query Range Score Percent Strand
RhoGAP16F-RF 3098 CG7122-RF 1080..1625 6..551 2580 98.4 Plus
RhoGAP16F-RE 2256 CG7122-RE 345..890 6..551 2580 98.4 Plus
RhoGAP16F-RD 2424 CG7122-RD 406..951 6..551 2580 98.4 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:10:49
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18095264..18095786 6..528 2540 99 Plus
Blast to na_te.dros performed on 2014-11-28 18:10:50 has no hits.

FMO12373.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-09 09:33:57 Download gff for FMO12373.5prime
Subject Subject Range Query Range Percent Splice Strand
RhoGAP16F-RA 670..1218 1..550 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:46:55 Download gff for FMO12373.5prime
Subject Subject Range Query Range Percent Splice Strand
RhoGAP16F-RD 402..950 1..550 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:52:35 Download gff for FMO12373.5prime
Subject Subject Range Query Range Percent Splice Strand
RhoGAP16F-RD 402..950 1..550 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:52:35 Download gff for FMO12373.5prime
Subject Subject Range Query Range Percent Splice Strand
X 18095260..18095808 1..550 97   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:46:55 Download gff for FMO12373.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_X 17989293..17989841 1..550 97   Plus