FMO12373.5prime Sequence
551 bp (550 high quality bases) assembled on 2012-10-09
> FMO12373.5prime
GTCGACATGCAGACGACGACAAGTCAGCGGCCAGTAACGCCTGGCACTCC
AGACTCGGCGCATATCGTAATCGGCGCCGCGGGATTCGTGGCACACGAGA
GACGCCAGCCCGGAAAGACCCTGATGAATTGCTTTCGCGATCGCTCCACG
ACGTCGTCGTCATCGTCGCAGGCCCAACACGCCTATGTGCGCGGCCACAG
CGTCACCTCGAGCACTCTGTTTCGCCTGGAGGGCAGTGGTGGCTCCAATT
GCACCTTGGACAAGGCGGGCAAGCAGGATACCGGGCGGCCCGAGGCGGTC
GTCCTACTCAGAGAGCTGAAAACCAGACCCAACAAGCTGGCTCTGCTCAA
GAGCAGCAGCAGCAAGGATCTGACCCGCCTGTTCCTGGACGATTCAACCA
ACACAGCCGTGCTGGTGTCCCACACCACTATAGATGTCTGCTCCTCAAAT
TCCTTCTCTGGCGGCAGTCCGGCGGTGGGCTGGTCCAAGTCCGGCAGGGA
TCGCCGCAATGGACTGGAGTGCTGCAGCCTTGCTCCAAAGCGTTGGCACG
A
FMO12373.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:10:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RhoGAP16F-RF | 3098 | CG7122-RF | 1080..1625 | 6..551 | 2580 | 98.4 | Plus |
RhoGAP16F-RE | 2256 | CG7122-RE | 345..890 | 6..551 | 2580 | 98.4 | Plus |
RhoGAP16F-RD | 2424 | CG7122-RD | 406..951 | 6..551 | 2580 | 98.4 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:10:49
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 18095264..18095786 | 6..528 | 2540 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-28 18:10:50 has no hits.
FMO12373.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-09 09:33:57 Download gff for
FMO12373.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RhoGAP16F-RA | 670..1218 | 1..550 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:46:55 Download gff for
FMO12373.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RhoGAP16F-RD | 402..950 | 1..550 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:52:35 Download gff for
FMO12373.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RhoGAP16F-RD | 402..950 | 1..550 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:52:35 Download gff for
FMO12373.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 18095260..18095808 | 1..550 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:46:55 Download gff for
FMO12373.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 17989293..17989841 | 1..550 | 97 | | Plus |