FMO12375.5prime Sequence
635 bp (635 high quality bases) assembled on 2012-10-09
> FMO12375.5prime
AGTCGACATGAAAACGGGCAGCAACAACAACCACATCTCCGCCAGCAGCA
GCAGCAGCAACAACAACAACAACAGCTCATTGGTGCAACAGCAGCAGCAA
CGCTCCACCACTTCCGTTTCCGTCTCCTCGTCTCACATTGTCACCGAGTG
GGAGGATGGCATCATTTTCGATGTGGACGATCCCGACTTTTGCAATCTGG
CCACCGACAAGCTGAACTTCATAGTGCCATCAGCAGCCAATATGTCGATC
GCCAGTGTTCACGGTCCCCAAATCGCCGACATCTGCAGTCCCCTGTCGCA
TCACAATCTCGGTCTGTCTGCCTCGCTGCCAGATCTGGTGGGCAGTCCCC
TGGAGATCAGCATGGACAACGTGCTGACCATTGAGGAGCTGCGCCAGCAC
ATGGGCTCCTGCTTCACCTGCGGCGTCTCCTGGACGGACGACCATGTGTC
CCTCGACTGCAGCGAATGCGGTGGCTACAGCCTGGAGCGTCCCTGTCCCC
TGTGCGACGGCCAGTGCGGTGTCCAATGGAAACGTGATTTCGCCATGTCC
CATGCCTGCAGTCAAGCTCGCTGGGTGGGCGTGTGCATCAGCTACCCGGA
AGTCGTGGCCGGAGTCCAGTTTGCCCGTGGGAGCA
FMO12375.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:10:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Pino-RB | 1980 | CG4710-RB | 151..777 | 8..635 | 3115 | 99.8 | Plus |
Pino-RC | 2130 | CG4710-RC | 518..927 | 225..635 | 2030 | 99.8 | Plus |
Pino-RA | 2079 | CG4710-RA | 467..876 | 225..635 | 2030 | 99.8 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:10:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 1116441..1116690 | 547..298 | 1250 | 100 | Minus |
2L | 23513712 | 2L | 1128129..1128345 | 224..8 | 1085 | 100 | Minus |
2L | 23513712 | 2L | 1115857..1115944 | 635..547 | 395 | 98.9 | Minus |
2L | 23513712 | 2L | 1117443..1117518 | 298..223 | 380 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:10:55 has no hits.
FMO12375.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-09 09:33:59 Download gff for
FMO12375.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pino-RB | 145..776 | 1..634 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:47:00 Download gff for
FMO12375.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pino-RB | 145..776 | 1..634 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:52:39 Download gff for
FMO12375.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Pino-RB | 145..776 | 1..634 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:52:39 Download gff for
FMO12375.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 1117444..1117516 | 225..297 | 100 | <- | Minus |
2L | 1128129..1128351 | 1..224 | 98 | | Minus |
2L | 1115858..1115943 | 548..634 | 98 | <- | Minus |
2L | 1116441..1116690 | 298..547 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:47:00 Download gff for
FMO12375.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 1116441..1116690 | 298..547 | 100 | <- | Minus |
arm_2L | 1115858..1115943 | 548..634 | 98 | <- | Minus |
arm_2L | 1117444..1117516 | 225..297 | 100 | <- | Minus |
arm_2L | 1128129..1128351 | 1..224 | 98 | | Minus |