Clone FMO12392 Report

Search the DGRC for FMO12392

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:123
Well:92
Vector:pMK33-CFH-BD
Associated Gene/TranscriptNTPase-RB
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12392.5prime Sequence

941 bp (841 high quality bases) assembled on 2012-10-09

> FMO12392.5prime
AGTCGACATGACGAACACCGATGTGCGAAAGAGAAAACTGGCCACGGATG
AGAAGCCACCGCGGCGGAAAAGTAGCGGATCACCAAATGCCAGCAGTGGT
GGAAACCGCGGGCCCAGCGGCCTCAAGATCTCCTTCCTGTGCCTGATCAT
CTCCGTCATCCTCCTGCTCTTTGTCTTTGGCTTCGTCTCCGAGAACGCCA
GTCCGTATCTGGCCCGTTTGGCCTCCAAGTTTGGCTACAGCAAGGTGCAG
TATGCGGCCATCATCGATGCCGGATCGACGGGCAGCCGTGTGCTGGCCTA
CAAGTTCAATCGCAGCTTCATCGACAACAAACTGGTGCTGTACGAGGAGC
TGTTCAAGGAGCGCAAGCCGGGTCTGAGCTCCTTCGCGGATAATCCCGCC
GAGGGTGCCCACTCCATCAAACTGCTGCTGGACGAGGCCCGCGCCTTCAT
ACCCTAGGAGCACTGGTCTTCCACACCGCTGGTTCTGAAAAGCGACCGCC
GGCCTGAGACTCCTGCCCGCCAGCAAGGCGGAAAACATTCTAAATGCCGT
CCGAGATCTCTTCGCCAAGTCCGAGTTTAGTGTGGATATGGATGCCGTGG
AGATCATGGACGGCACGGACGAGGGCATCTTCAGCTGGTTTACCGTGAAC
TTCCTGCTGGGCCGCCTGTCCAAGACGAACCAGGCAGCTGCCTTGGACTT
GGGCGGCGGTAGCACGCAGTAACCTTCTCGCCAACGGATCCGGACCAGGT
GCCCGTGTACGATAAGTACATGCACGAGTGGTCACGTCCAGCAAGAAGAT
CAACGTCTTCACGCACAAGCTATCTGGGACTGGGTTCTAATGCTGCACGC
ATGCTGTCTTCACGCACGCTACAGAAGAGATACGTGCTGGAAAGCGTCTG
CTGAATCCCAATATCGCCAATCGCACGTGGACATACTGTCA

FMO12392.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:11:23
Subject Length Description Subject Range Query Range Score Percent Strand
NTPase-RE 2111 CG3059-RE 193..1128 8..936 4310 98.2 Plus
NTPase-RA 2095 CG3059-RA 208..1113 38..936 4160 98.1 Plus
NTPase-RC 2182 CG3059-RC 294..1199 38..936 4160 98.1 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:11:21
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 2881748..2882512 936..179 3170 97.3 Minus
2L 23513712 2L 2882691..2882833 180..38 715 100 Minus
Blast to na_te.dros performed on 2014-11-28 18:11:22 has no hits.

FMO12392.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-09 09:34:07 Download gff for FMO12392.5prime
Subject Subject Range Query Range Percent Splice Strand
NTPase-RB 179..1125 1..940 97   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:47:19 Download gff for FMO12392.5prime
Subject Subject Range Query Range Percent Splice Strand
NTPase-RE 185..1131 1..940 97   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:52:56 Download gff for FMO12392.5prime
Subject Subject Range Query Range Percent Splice Strand
NTPase-RE 185..1131 1..940 97   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:52:56 Download gff for FMO12392.5prime
Subject Subject Range Query Range Percent Splice Strand
2L 2881745..2882511 180..940 97 <- Minus
2L 2882692..2882833 38..179 100 <- Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:47:19 Download gff for FMO12392.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_2L 2881745..2882511 180..940 97 <- Minus
arm_2L 2882692..2882833 38..179 100 <- Minus