FMO12392.5prime Sequence
941 bp (841 high quality bases) assembled on 2012-10-09
> FMO12392.5prime
AGTCGACATGACGAACACCGATGTGCGAAAGAGAAAACTGGCCACGGATG
AGAAGCCACCGCGGCGGAAAAGTAGCGGATCACCAAATGCCAGCAGTGGT
GGAAACCGCGGGCCCAGCGGCCTCAAGATCTCCTTCCTGTGCCTGATCAT
CTCCGTCATCCTCCTGCTCTTTGTCTTTGGCTTCGTCTCCGAGAACGCCA
GTCCGTATCTGGCCCGTTTGGCCTCCAAGTTTGGCTACAGCAAGGTGCAG
TATGCGGCCATCATCGATGCCGGATCGACGGGCAGCCGTGTGCTGGCCTA
CAAGTTCAATCGCAGCTTCATCGACAACAAACTGGTGCTGTACGAGGAGC
TGTTCAAGGAGCGCAAGCCGGGTCTGAGCTCCTTCGCGGATAATCCCGCC
GAGGGTGCCCACTCCATCAAACTGCTGCTGGACGAGGCCCGCGCCTTCAT
ACCCTAGGAGCACTGGTCTTCCACACCGCTGGTTCTGAAAAGCGACCGCC
GGCCTGAGACTCCTGCCCGCCAGCAAGGCGGAAAACATTCTAAATGCCGT
CCGAGATCTCTTCGCCAAGTCCGAGTTTAGTGTGGATATGGATGCCGTGG
AGATCATGGACGGCACGGACGAGGGCATCTTCAGCTGGTTTACCGTGAAC
TTCCTGCTGGGCCGCCTGTCCAAGACGAACCAGGCAGCTGCCTTGGACTT
GGGCGGCGGTAGCACGCAGTAACCTTCTCGCCAACGGATCCGGACCAGGT
GCCCGTGTACGATAAGTACATGCACGAGTGGTCACGTCCAGCAAGAAGAT
CAACGTCTTCACGCACAAGCTATCTGGGACTGGGTTCTAATGCTGCACGC
ATGCTGTCTTCACGCACGCTACAGAAGAGATACGTGCTGGAAAGCGTCTG
CTGAATCCCAATATCGCCAATCGCACGTGGACATACTGTCA
FMO12392.5prime Blast Records
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:11:23
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
NTPase-RE | 2111 | CG3059-RE | 193..1128 | 8..936 | 4310 | 98.2 | Plus |
NTPase-RA | 2095 | CG3059-RA | 208..1113 | 38..936 | 4160 | 98.1 | Plus |
NTPase-RC | 2182 | CG3059-RC | 294..1199 | 38..936 | 4160 | 98.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:11:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 2881748..2882512 | 936..179 | 3170 | 97.3 | Minus |
2L | 23513712 | 2L | 2882691..2882833 | 180..38 | 715 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 18:11:22 has no hits.
FMO12392.5prime Sim4 Records
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-09 09:34:07 Download gff for
FMO12392.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
NTPase-RB | 179..1125 | 1..940 | 97 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:47:19 Download gff for
FMO12392.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
NTPase-RE | 185..1131 | 1..940 | 97 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:52:56 Download gff for
FMO12392.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
NTPase-RE | 185..1131 | 1..940 | 97 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:52:56 Download gff for
FMO12392.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 2881745..2882511 | 180..940 | 97 | <- | Minus |
2L | 2882692..2882833 | 38..179 | 100 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:47:19 Download gff for
FMO12392.5prime
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 2881745..2882511 | 180..940 | 97 | <- | Minus |
arm_2L | 2882692..2882833 | 38..179 | 100 | <- | Minus |