Clone FMO12402 Report

Search the DGRC for FMO12402

Clone and Library Details

Library:FMO
Tissue Source:D. melanogaster
Created by:Charles Yu
Date Registered:2006-03-07
Comments:BD Creator expression clones with C-terminus FLAG HA tag for tissue culture
Original Plate Number:124
Well:2
Vector:pMK33-CFH-BD
Associated Gene/TranscriptEloA-RA
Protein status:
Sequenced Size:Not sequenced

Clone Sequence Records

FMO12402.5prime Sequence

1098 bp (808 high quality bases) assembled on 2012-10-19

> FMO12402.5prime
AGTCGACATGGCCTCCACCAGCAATCTGCTGGACGTGGTGCGCCACTACC
AGCGCAGCATTGAGAAGCACGGCGAGGACGAACAACGGCTGCTGCACTGC
ATCACCAAGCTGTTCAACCTGCCGATCAAATTCGAGCACCTGCAGGAAAC
GGGAATTGGCAAGACGGTGAATGCCCTGCGCAAGATCAGCGGGGAAGTTG
GCGTGGCGGCCAAGACGCTGGTAACCAAGTGGAAGGCAATGGTGGCGAAG
GAGGACCCTTCGATCGCATCTACGCCTACAGCCATACATAACGAAGAGGA
CTCGGGCAAGACCAAGTCCAGCGACGAGGATCCCGACCAGGAGAACAAGG
GCGGCAACTCATCCAGCGGCGAGGACTTGAACGTTACAAGCACAAGTCAA
AGCATGCCAAGAGCACCAAGCATGAGCGTAGCAGCAGCAGCCGATCTCAC
TCTAATTTTTTTGTCTGACTCGGATAAGAAGCACAAGAGCTCTCGCCACG
ATAAATCCAAGGATAGAGATAAAGATCGGGAGGGTCAGAAGGAAGCTAAG
GAGCACAAAGAAAAGAAGTCAAATGGCGAGCACAAGTCAAAGGATTCCAG
CAAATCCAGCAGCAGTCACAAGAGCAGCAAATCCGAGAGCCACAAGAGCG
AACACACCAAAAGCAAGCACGAAAAGGACAAAACTTCTCACAGTGAATTC
AAGGAAGTCAAAGACAAGTCGAGCAAACACAAATCATCGTCCTCCAAGTC
ATCAAAGCGCTCCCATAGTTCCCCACGCACGAGGAGGAGTCCAAAAAGCA
AAGATACAAAAGTAAATCGAAATCTGAGGAGATTCGCTGATGTTTGACTC
AGCATGGCGCAATTTTGACGATGTCTGGTCTGCTAACTACCATAATAGCA
GGAGAGCACAGTAACGCAGAGCAGTTTGTCGCAAGCAACTGCAGCCCTTC
CTCGTCGCTTATCAGCCTACGATGTTGGTCATCTAGAGGCCTCCACTAGC
GTCGACTGACCCAAACCGGACTGTGTCCAGCTAACTGAACCTTGATCAAA
TTGCTAGACTCCACATCAAATAGGCCAGGCTAATCAAAGTTGGAGGCC

FMO12402.5prime Blast Records

Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:15:07
Subject Length Description Subject Range Query Range Score Percent Strand
EloA-RA 2869 CG6755-RA 315..1355 8..1011 4045 94.7 Plus
EloA-RB 2697 CG6755-RB 224..1183 89..1011 3640 94.3 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 18:15:05
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 23252248..23252837 88..677 2720 98.1 Plus
3R 32079331 3R 23252890..23253049 675..830 575 95 Plus
3R 32079331 3R 23251877..23251957 8..88 405 100 Plus
Blast to na_te.dros performed on 2014-11-28 18:15:06 has no hits.

FMO12402.5prime Sim4 Records

Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-10-19 11:25:07 Download gff for FMO12402.5prime
Subject Subject Range Query Range Percent Splice Strand
EloA-RA 324..1327 1..972 95   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:49:54 Download gff for FMO12402.5prime
Subject Subject Range Query Range Percent Splice Strand
EloA-RA 305..1308 1..972 95   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 18:55:14 Download gff for FMO12402.5prime
Subject Subject Range Query Range Percent Splice Strand
EloA-RA 305..1308 1..972 95   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 18:55:14 Download gff for FMO12402.5prime
Subject Subject Range Query Range Percent Splice Strand
3R 23251867..23251957 1..88 95 -> Plus
3R 23252249..23252836 89..676 98 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:49:54 Download gff for FMO12402.5prime
Subject Subject Range Query Range Percent Splice Strand
arm_3R 19077589..19077679 1..88 95 -> Plus
arm_3R 19077971..19078558 89..676 98 -> Plus